Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1150 ATGACAATCGAGAAAAAGAAATCAAATGGGGATTCGGTTGATATCAGATTGAGGAAGGCTTTCGGTGCGTGGCTTGCAATGGAGAAACAAAAGAATCCTCAGTTATTTTCGTTCCTTGAGGAGGAGGAGGACACTCAGATTTTGAAGGGCCTCATGATCAGATCAAGAAATGCTAAAAGAAAGAGACAAGAAGAAGAAAGCACGTCGATTGAATTGCCAAAGCCGTTTAAAGAAAAGGTTCAAGAACTGAAGGGGTGCGAGGTGAGTTTTCTGATGCAGAAGAAGCTCTCTGACTCAGACTTGAACCCAGTCCTAAACCATGGCTCCTTCTCTATCAACATTGCCGACAAGAATAATTTTCTGATAGAAAAGGAGGAAAACAAAACGCTTGCTGGCATGCACGTCATTGTGTTGGATCCTTCACTCAGAGAGTGCAACATGTGCTTCAAAAAGTGCCCAATAAGAAGCCACTTCTACAACTTGACCAACGGATGGAACCAGATTGTGCTTCAGAATGATCTCAAACTCAACGACACGCTGCAGCTTTGGTCCTTCAGAGTCTCTTGTCTTCTCTGGTTTGCACTTGTCAAGCTCTGA 597 0.4355 MTIEKKKSNGDSVDIRLRKAFGAWLAMEKQKNPQLFSFLEEEEDTQILKGLMIRSRNAKRKRQEEESTSIELPKPFKEKVQELKGCEVSFLMQKKLSDSDLNPVLNHGSFSINIADKNNFLIEKEENKTLAGMHVIVLDPSLRECNMCFKKCPIRSHFYNLTNGWNQIVLQNDLKLNDTLQLWSFRVSCLLWFALVKL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1150 198 SUPERFAMILY DNA-binding pseudobarrel domain 92 196 IPR015300 -
Aed5g1150 198 CDD B3_DNA 90 193 IPR003340 GO:0003677
Aed5g1150 198 Gene3D - 83 193 IPR015300 -
Aed5g1150 198 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 32 198 IPR005508 GO:0003677
Aed5g1150 198 Pfam B3 domain-containing protein At2g31720-like 89 169 IPR005508 GO:0003677
Aed5g1150 198 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 32 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1150 Aed-Chr5 9872827 9873423 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1150 68 195 B3 DNA Binding Superfamily AT1G05930 24.638 4.54e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1150 - - gmx:102668896 262.692