Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1146 ATGGGAATGCAAGGAGGAAAGAAAGAATTGGGGAATGGAGTGGAGAAAATGGGAAAGAAGATCAGTCTCAAAAGAAAAGCCGAAAGAGGAGAAAATAATCATAAGCCGCTGCTGTCAAAGAGAGTCAAAAGCGAAGAAGAAGCGGAAGCGAGTACCAGTCGTCTTCCACAACATGGTAAATCCAAATTTGAATATCTACTCGATGCAGTGTCATTATTTACTGCGTATGAAAAGGAAAAGGAACGTGAGCGTGAACGTGAACGTGATGATGAGCAAGAGCAAGAGCAAGGGCACCCTGATGATGATGAAGAAATAATATTGCCAAAGGAATTTGAAGAAAAGATAAAAGAATTGAATGGAAGCGATGTGAAGTTTGTGATGCAGAAGAGGCTTTTTAGGACAGACGTGAACCCACACCAAGCTCGCTTGTCTATCGCACCCAAAAAGATTTCCAACAAATTTCTGACACAAAGTGAGGAGTCTTCCTTAGACGAGGCTAATAAAAAAACAAAAAGTTGTAGTAATGGCCTAAACAGATCAAAGCCTCCTTCTGGCATGGCCGTGAAGATGGTGTTGGATCCTTCTCTGAGAGAGTGCAACGACATGCGCTTCAAGAAGTGGGTAATGACGAGAAGCCCCACTTACAACTTGACCCAGGGATGGAACAAGATTGTACAACACAACAATCTCAAATTTGGTCATATGCTACAAATCTGGTCCTTCAGAATCTCTTCTCACCTCTGTTTCGCACTAGTCAATAAGAACATCTGA 771 0.4215 MGMQGGKKELGNGVEKMGKKISLKRKAERGENNHKPLLSKRVKSEEEAEASTSRLPQHGKSKFEYLLDAVSLFTAYEKEKERERERERDDEQEQEQGHPDDDEEIILPKEFEEKIKELNGSDVKFVMQKRLFRTDVNPHQARLSIAPKKISNKFLTQSEESSLDEANKKTKSCSNGLNRSKPPSGMAVKMVLDPSLRECNDMRFKKWVMTRSPTYNLTQGWNKIVQHNNLKFGHMLQIWSFRISSHLCFALVNKNI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1146 256 Coils Coil 73 93 - -
Aed5g1146 256 SUPERFAMILY DNA-binding pseudobarrel domain 126 252 IPR015300 -
Aed5g1146 256 MobiDBLite consensus disorder prediction 78 93 - -
Aed5g1146 256 MobiDBLite consensus disorder prediction 78 106 - -
Aed5g1146 256 Pfam B3 domain-containing protein At2g31720-like 114 226 IPR005508 GO:0003677
Aed5g1146 256 MobiDBLite consensus disorder prediction 157 185 - -
Aed5g1146 256 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 49 252 IPR005508 GO:0003677
Aed5g1146 256 MobiDBLite consensus disorder prediction 1 60 - -
Aed5g1146 256 Gene3D - 116 254 IPR015300 -
Aed5g1146 256 MobiDBLite consensus disorder prediction 12 53 - -
Aed5g1146 256 PANTHER DUF313 DOMAIN PROTEIN 49 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1146 Aed-Chr5 9829237 9830007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1146 115 251 B3 DNA Binding Superfamily AT1G05930 30.282 1.73e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1146 - - gmx:102667627 215.312