Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1107 ATGAGGGGCGGTGAGGAGCGAGGGATTAGGAAGAAGGGAAGCGGAGTGAGGCAATGGCTGGTCCTGGAGGGCAGAGGAGAGACGCAGGTGGTGGAGGCAGGGAAGCACGCAATCATGAGGCGAACGGGGCTCCCGGCACGTGACCTGCGGATACTGGACCCTCTCCTGTCTTACCCTTCCACCCTTCTAGGGCGTGAGAGGGCGATCGTGATTAACTTGGAGCACATAAAGGCCATCATAACGGCGAACGAGGTTCTTCTCCTTAACTCCCGTGACCCATCGGTGACTCCCTTCGTACAGGAGCTCCAGGCAAGGATAATCCGGCACCATCAAGCTCCAAACCTTAATTCCAATCCGGATCCTGATCCTCACCACGACCATGAGGCCATCAAGATTCTCCCCTTCGAGTTCGTAGCCCTTGAGGCATGTCTTGAAGCCGCCTGTAGCGTTTTGGAAAACGAGGCAAAGACTCTTGAGCAGGAGGCTCATCCCGCCTTGGACAAACTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAGATTAAGAGCCGCTTAGTCGCCATCACTGGTCGTGTTCAGAAGGTCAGGGATGAATTGGAGCACTTGCTCGACGACGATGATGATATGGCTGAGATGTATCTCACCGATAAGTTATTAGCAGCAGCTCAACAACAACAGCAACAACATGATGATGATGATGATGACGACTTGAAACAAGAAACGGAATCAACCTCTTCTGTCCACGACGACGCCGCTGAAATATCCTACGACAATGTCCGCGCTAGCTCCACGTATAGTGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAGATGCTCTTGGAGGCTTACTTTGTGCAGATTGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACTGAGGATTATATCAACATAATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTCGTGGCCGGTATTTTTGGCATGAATATTCACATTGAGCTATTTGACGATACTAAAGCTGGGATGCCACAGTTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTAGAGTAA 1188 0.5109 MRGGEERGIRKKGSGVRQWLVLEGRGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARIIRHHQAPNLNSNPDPDPHHDHEAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLLAAAQQQQQQHDDDDDDDLKQETESTSSVHDDAAEISYDNVRASSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDTKAGMPQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1107 395 Gene3D - 6 90 - -
Aed5g1107 395 MobiDBLite consensus disorder prediction 224 254 - -
Aed5g1107 395 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 395 IPR039204 -
Aed5g1107 395 PANTHER MAGNESIUM TRANSPORTER MRS2-3 7 395 - -
Aed5g1107 395 Gene3D Magnesium transport protein CorA, transmembrane region 93 323 - -
Aed5g1107 395 CDD Mrs2_Mfm1p-like 19 393 IPR039204 -
Aed5g1107 395 Pfam CorA-like Mg2+ transporter protein 279 384 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed5g1107 395 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1107 Aed-Chr5 9371541 9373734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1107 19 395 MRS2 Gene Family AT3G19640 63.014 5.25e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1107 - - gmx:100819578 607.446