Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1097 ATGGTGTTATCAGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTGGAGGAGATGCTCGATTCCCTTCGCCGGAGGGACGAGGAGGATGAGAAGAAGGAATTGCCGCCGGCGTTGCCCGTGAGGCCGACCTCGCGGGCACGGCTTCCTCCGGCGCGGCGGTCGCTGCCGCACAACTTCAAGGTTGGGAGCGCCATCGCGCCGGAGAATGGAGTTGGGACTAATGGGGAGAGTGAAGTGAAGGAGAGTGATTTGGGGCAGAAGAGGAGAAGGAATGATTTTGGGAGCAAGAGGGTGAAGAAGGATGTGGAGTCTCCTTATGTGGCACTTTCTTCTTCTTCTAGTGATTCATCAGGGATGGTTTGGGAATTGGAGAGTGATGATAGCATTTCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGATCTTGGAACGATACAGTCAACTTCAGGAGAGGAGGCATCTGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGTCAGATCAGAGATTCTACCAGCTAATCCCGATGTTTTGGAGGGTGTTGATGATCTTAATAAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAGTTGAGATATTCTCAAAGGATGATTTATAGTAAAGCAGGGCCAATTTTAGTTGCACTCAATCCTTTCAAAGATCTTCAGATACCTGAAAATTATTATGTCTCAGCTTATAGACAGAGAATTATTGATAGTCCCCATGTTTGTGCTGTGGCAAATGCAGCTTATAACAAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGGTCAGGGAAGACAGAAACAGCTAAAATTGCATTGCAATACTTAGCTGCTCTTGGTGGTGGTGGCAGTTCTGCGATAGAAAATGAATTTCTTCAGATAAATCATATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCTCCATGGGTAAAATATGTGGGGCTAAACTTCAAACCTTAATGTTGGAAAAGTCTAGAGTTGTTCAACTGGCCAATGGTGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGGTCTTAAAGAGAGACTGAATCTTAGAGCAGTCAGTGAATATAAATATCTAGTTCAGAGTGACTGCATGTCAATTGATGGTGTTGATGATGCTAAAAACTTTCATCAGCTGATGGTATATCACTTGACAGTTAGTTTGGTTTACCATAAACTCTTTAACTTTGATTTTGACCTCCTAAGATCTCATGTCATTTCCCAGACAGCACTGGATACTGTTCAAATTTGTAAAGAGGATCAAGAGCTGCTCTTTAAGATGCTTGCTGCAATACTATGGCTAGGAAATATATCATTCCAAGTAGACCGTGAAAATTGTGTTGAGGTTGTCGATGGTGAAGCTGTAACCAGTACTGCCCAGCTGATGGGTTGCAGTTCCCAGGAATTAATGACAGCATTATGTACCCATAAAATTCAATCTGACGTGGATACGATTACCAAAAAATTGTCATTGAGGCAGAAAAACAGCTTTGAACAGTTTTATATAAACTATGCCAATGAGAGGATTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTGGATGGTGTTGATTGGACTAAAGTAGATTTTGAGGATAATGAAGGGTGCTTGGATCTGTTTGAGCAGAAACCTCATGGTCTACTCGCTTTATTGGATGAGGAGTCAAATTTAGCCAAGGCTTCTGATTTAACATTTGCCAACAAACTTCGGCACCACCTGGATGCTAATCCTTGTTTCAAAGGAGAAACAGCCAGAGCTTTCAGTGTTCGTCACTATGCTGGGGAGGTTCTGTATGATACAAATGACTTTCTAGAAAAGAACAGAGACATGTTGTCTTCGGATTCCATTCAATTCCTGTCATCCTGTAATTGTGAACTTCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCTGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACGCCTCACTTTATTCGCTGCATAATGCCGAATACTAAGCAGCTTCCTGGCATTTTTGATGAAGGCCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCTAGAAGTTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGGCCCATCAAGAGTTTTCCAGACGGTATGGTTTTCTGCTCTCCAAAGCCAATGCATCGCAGGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAGTTCAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGCACAGATTGATGCATTGGAGAATAAGAGAAAACAGGTTTTGCTGGGAATACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGTGGTTATTTCTGTGAACTTAAGAATGGAGTGACAGCATTACAATCATTTATTCGTGGAGAAAATACAAGAAGGAAATATGGTGTTACGGTGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCCGTAATTCGTGGTTGGCTGGTTAGAAGGGATGATAGTCACGTAAATAGGTCAAAGAGATATCCTGAAAATGCTAAACCTAGGCGGAAGTCCTTTATGAAGAGAATACCAGAAGTAAAGGACTTGTCCAAAGAGCCGGTTCAGAATCTGGTTTCAGCTATAGTAGAACTCCAAAGGCAGGTTGACAAAGCTGATGCGATTGAGGAGCAAAAGGAAGATGAAATAACCGAATTGAGGGAACAGCTAAAACAATCTGAGAGGAAGAGGATTGAATATGAGACAAAAATGAAATCAATGGAGGAGGCTTGGCAAATACAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAAAAAGAGCCTTGCTCCTGAGAATGCCACCATTCAACCTGCGAGACGTGATATCGTGTTGCCTCGCAGTTATGATTCTGAAGATGCCACTTCTGTGGGATCTCGAACACCTGGTGGGAGCACACCATTGCTTTCTGGCAGTCTATCTGTCAATGGTACTTTGACCACTGTCAGCACTTTGATGAAGGAATTTGACCAGCGAAGACAGAACTTTGATGATGGAGTAAAAGCTCTGACCGAGGTTAGACCGGAGCAGTTTGCCAACGCAAATTCCTCCGAAGAGCTTCGGAAACTTAAACAGAGGTTTGAGGGATGGAAGAATCAATACAAGATTAGATTACGCGACGCCAAAACAAAGCTTCATAAATCAGAGACGGAAAAATGTCGGCGAACATGGTGGGGGGGGAAGATAAGCTTAAAACCATAA 3447 0.4209 MVLSASPCSLARSSLEEMLDSLRRRDEEDEKKELPPALPVRPTSRARLPPARRSLPHNFKVGSAIAPENGVGTNGESEVKESDLGQKRRRNDFGSKRVKKDVESPYVALSSSSSDSSGMVWELESDDSISYFIKKKLRVWCRQPRGQWDLGTIQSTSGEEASVSLSNGNVMKVVRSEILPANPDVLEGVDDLNKLGYLNEPSVLHNLKLRYSQRMIYSKAGPILVALNPFKDLQIPENYYVSAYRQRIIDSPHVCAVANAAYNKMIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGSSAIENEFLQINHILEAFGNAKTSRNNNSSRFGKLIEIHFSSMGKICGAKLQTLMLEKSRVVQLANGERSYHIFYQLCAGSSSGLKERLNLRAVSEYKYLVQSDCMSIDGVDDAKNFHQLMVYHLTVSLVYHKLFNFDFDLLRSHVISQTALDTVQICKEDQELLFKMLAAILWLGNISFQVDRENCVEVVDGEAVTSTAQLMGCSSQELMTALCTHKIQSDVDTITKKLSLRQKNSFEQFYINYANERIQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNEGCLDLFEQKPHGLLALLDEESNLAKASDLTFANKLRHHLDANPCFKGETARAFSVRHYAGEVLYDTNDFLEKNRDMLSSDSIQFLSSCNCELLQLFSKMFNQSQKLSVATKFKVQLFKLMHQLESTTPHFIRCIMPNTKQLPGIFDEGLVLQQLRCCGVLEVVRLSRAGYPTRMAHQEFSRRYGFLLSKANASQDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAAQIDALENKRKQVLLGILGIQKCFRGHQARGYFCELKNGVTALQSFIRGENTRRKYGVTVKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDDSHVNRSKRYPENAKPRRKSFMKRIPEVKDLSKEPVQNLVSAIVELQRQVDKADAIEEQKEDEITELREQLKQSERKRIEYETKMKSMEEAWQIQMASLQMSLVAAKKSLAPENATIQPARRDIVLPRSYDSEDATSVGSRTPGGSTPLLSGSLSVNGTLTTVSTLMKEFDQRRQNFDDGVKALTEVRPEQFANANSSEELRKLKQRFEGWKNQYKIRLRDAKTKLHKSETEKCRRTWWGGKISLKP 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1097 1148 ProSiteProfiles IQ motif profile. 882 910 IPR000048 GO:0005515
Aed5g1097 1148 MobiDBLite consensus disorder prediction 21 36 - -
Aed5g1097 1148 Coils Coil 1095 1133 - -
Aed5g1097 1148 SMART MYSc_2a 181 821 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 Gene3D Kinesin motor domain 152 461 IPR036961 -
Aed5g1097 1148 MobiDBLite consensus disorder prediction 80 97 - -
Aed5g1097 1148 MobiDBLite consensus disorder prediction 1027 1053 - -
Aed5g1097 1148 Gene3D - 540 710 - -
Aed5g1097 1148 ProSiteProfiles IQ motif profile. 845 874 IPR000048 GO:0005515
Aed5g1097 1148 PRINTS Myosin heavy chain signature 217 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 PRINTS Myosin heavy chain signature 523 551 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 PRINTS Myosin heavy chain signature 271 296 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 PRINTS Myosin heavy chain signature 576 604 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 Gene3D - 826 870 - -
Aed5g1097 1148 ProSiteProfiles IQ motif profile. 825 851 IPR000048 GO:0005515
Aed5g1097 1148 MobiDBLite consensus disorder prediction 1034 1053 - -
Aed5g1097 1148 PANTHER MYOSIN-2 ISOFORM X1 443 536 - -
Aed5g1097 1148 Gene3D - 753 821 - -
Aed5g1097 1148 Gene3D Kinesin motor domain 711 748 IPR036961 -
Aed5g1097 1148 Coils Coil 12 32 - -
Aed5g1097 1148 CDD MYSc_Myo8 201 808 IPR036022 -
Aed5g1097 1148 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 134 183 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 PANTHER MYOSIN 443 536 - -
Aed5g1097 1148 MobiDBLite consensus disorder prediction 21 97 - -
Aed5g1097 1148 Pfam IQ calmodulin-binding motif 884 900 IPR000048 GO:0005515
Aed5g1097 1148 Coils Coil 937 992 - -
Aed5g1097 1148 ProSiteProfiles Myosin motor domain profile. 187 820 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 SMART iq_5 844 866 IPR000048 GO:0005515
Aed5g1097 1148 SMART iq_5 821 843 IPR000048 GO:0005515
Aed5g1097 1148 SMART iq_5 881 903 IPR000048 GO:0005515
Aed5g1097 1148 Gene3D Myosin VI head, motor domain, U50 subdomain 462 539 - -
Aed5g1097 1148 Gene3D Myosin VI head, motor domain, U50 subdomain 660 688 - -
Aed5g1097 1148 PANTHER MYOSIN-2 ISOFORM X1 116 423 - -
Aed5g1097 1148 PANTHER MYOSIN 536 1143 - -
Aed5g1097 1148 PANTHER MYOSIN 116 423 - -
Aed5g1097 1148 Pfam Myosin head (motor domain) 536 808 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 Pfam Myosin head (motor domain) 189 422 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed5g1097 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 901 IPR027417 -
Aed5g1097 1148 PANTHER MYOSIN-2 ISOFORM X1 536 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1097 Aed-Chr5 9288957 9299885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1097 1 1143 Myosins gene family AT5G54280 53.803 0.0 1268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1097 K10357 - gmx:100802074 1816.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1097 5 9288957 9299885 Aed5g1097 5 9288957 9299885 ECH