Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1086 ATGGATGCAATTGCAAGCGTGGCATCAAACGTGGCTGCACCTCTGCTGAAGCACCTCACCTACGTGTTGATGTACAGCACATACTTGAATCAGTTAGAGACCGAGCTCCAGAGGCTGCAGCACGAGGAGAAGGAGGTGAGGCACACGGTGGAGGCTGCAAAGAGGAGCGGCGAGGAAATAGAGGACACCGTGCTGGACTGGTTCGGGAGAGTTCGTGCAGCCGTGGAGGAAGGCCAGGCCTTCCTCCGCGGCGAGGATGAAGATAGAGTCGGCTGCATGGACGTGTACTCGAGGTACATGAAGAGCCAGAGGGCTAAAGAACTGGTGGACAATGTGAGGGAGATGAGGAACGAATCGTTTGACCAGGTTTCGTACCGGTGTGCATTGAGATGCAATGTTGGCCCTGCTGCTAGGGAGTATGTGGAGTTGGAATCGAGAACAAAGATGCTGAGTGATGTTTTGAGGGTTTTGGAGGATGGAATGGTTGACATTGTTGGAATTTACGGGATGGCTGGCGTCGGGAAGACTGCCTTGGTGAAGGAATTGGCGTGGCAGGCGGAGACTGAGGGCTTGTTTGATGCTGTTGTCATGGCGACGGTGACAAATTCTCCGGATGTTGGGATGATCCGAGCGGAGATCGCGGACGGGCTGGGATTGAAGTTCGATGAGCTGACCGAGCTGGGGCGAGCGAGCAGGCTGCGCCAGAGGATCAGGCAGGAGCAGAGGGTTCTTGTGATTTTGGATGATGTGTGGGGGAAACTTGAGTTGACACAGGTTGGTGTTCCTTTTGGTGAGAACAAGAGAGGCTGCAAGTGCCAGTTGTTGGTGACATCAAGAGATGTTAATGTGTTGAATACTAACTTTGAGGTGGATAGGGTTTATAGGCTTGAGGCTTTGTCTGAGGGTGAGAGTTGGAAGTTGTTTGAGAAGAGGAGAGGGGATGATTCAGTTAAGGATGCCAGCATTCAGCCGGTGGCGGAGAAACTTGCGAAGAGCTGCGGTGGTTTGCCGCTTTTGATAGTGACTGTTGTGGAGGCAATGAAGAACCAGGACTTGTATGCTTGGAAGGATGCATTGGAGCAGATAACAACTTTTGAACTTGAGGGGTGTTTTTACTCTCCTGTGTGTTCTGCTATTGAGCTTAGCTATGACCATTTGGAAAGCCATGAACTCAAAACTTTCTTCCTCCTTTTGGGATCCATGGGAAGTGGTTGTACCACAAGAGATTTGTTGGTGTTTGGTTGGTGCCTTGGATTGCACAAACATGTTTATACATTGGCAGATGGGAGAAACAGGCTTTATAAATTGATAGACGACCTGAGAGCTGCTTCTTTGTTGCTTGATGAAGGACAAAGAGATTCGGTTGCAGCGCTAGACGTGGTTCGACGTGTGGCTGCCTCCATTTCATCCAGGGTCAAACCCTTCTTTACTGTGCAGAGAAACACTGAATTGAAGGAATGGCCAAGAGTTGATCTCTTAAGAACTTGTCATCATATTTTCTTGGATTGGTGTTATATCCGCGAACTTCCTGAGGTGTTAGAATGTCCCAAGTTGAAGATACTCAAACTAAATATTCAAGGTAACTCTTTGAAAATTCCTGATAATTTCTTTGTTCAAATGCAAGAACTGAAGGTGTTGAGTTTGGGAGGTCTAAATTGTACTCCTTCCCTTCCTCCATCTCTCAGTCTCTTGACAAACCTCCAAGGATTGTATCTGTGTAAATGCATGTTGGAAGACATAGCTATTGTTGGGGAAATCACAAGTTTAGAGATTCTCAACCTTGAAAAATCTGAGATTAGAGAGCTCCCTACAGAAATAGGAGGATTGAGTAATCTAAAGTTGCTAGACTTGACTGATTGTTCAACACTAGGAGTGATTCCTCACAACGTGATATCGAGCTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTGATGTTCAAGAGGAAGTCAATGGAAGCAAAAGCAAAAGCCAAAGCATTGATTCATGTTTAAATGAGTTAAGGCATTTGAGTCAACTAACAACTTTGAATGTGCAGATAGAAGATACATCAATTTTTCCTAGAGACTTGCTTGGCTTTGGAAGATTAGAGAGCTACAAGATTTTGATTGGAGATGGATGGAAATGGTCTGCGGTGGAGTCTGGGAATTACGAAACTTCAAGACTTCTTAAGCTCAATTTGGGCGCGGATCCAAGCATTCTAATGGATTATGGGATAAAGATGCTGATGGCAAAGGCTGAAGATTTGTATTTGGCTGAACTGAAGGGTGTCAGGGAAGTACTTTATGAATTGAACGACGAAGGGTTTTCGCAACTGAAGCATCTTAACATTCTAAACTGTGCTGAAATGGAGAGCATTATTGGCTCAACAGAGTGGGCTTATCGCGATCATGCCTTCCCAAAGCTAGAATCGTTGATCCTTCACAATCTGGTTAACATGGAGAGAATATGCAGTGACCCTCTTCCAGCACAGGCCTTTACCAAACTACAAGTTATCAAAGTAAAGGGTTGTGATAGGATGGAGTTTGTTTTCTCGCATTCCATGGTTAAACACCTTTCTGAACTTGTTGAGATTGAGATTTCTGAATGCAAGTGCATGACCAATATCATAGCCGAGCAAAGACAAGAGGATGCTGATGCCGGACAAACTGATAAGATCAGACTCGTCAAACTGCGTTCCCTTACTCTAGAATGCTTACCTTCGCTTGTTAGTCTCTCACCTGAGTCATCTTCTGAGGCTACTGAAAATGGCAATGATTTTTCTACTCAACTTTTCAATGACAAGGTTGAATTTCCAAACTTGGAAACCTTGAAGTTGTACTCAATCAACATCCATAAGATATGGAATCACCAACATTCTTACTTTCAAAATTTGACCTCTTTGACCGTAGATGGATGCAACCGGTTGACACGTGTTTTCTTATACTCTGTGGCTACCAAACTTGTCAAGCTTGAACATCTTTTAATTAGTTCGTGCAAATCCGTGGAGAAGATATTTGTATCAGACGAAAACTTAAGTCACCATCATCATTTCAGAAAACCTGATCCAACTGAACTGGTTCCAATTTTCCCCAACTTGGAGACATTTGTGATTTCTGAAATGGACAACTTGAAGTCGATATGGCCCGAGCAACTCACCGAAAATTCCTTTTGTAAATTGAAAAAGATGGAAATCACATCATGTAACAATCTCTTGAATGTGTTTCCATGTCATATGCTGGACAAATTGCAAAGCCTGGAATCACTGGATTTACAGAACTGCATGGCACTGGAAGTTGTATATGAAATCGATGGTATAAACACAGAGCAAGGAGGGCTGAACATTCCTCTGAAAACCATGTCTTTGGGGAATTTACCAAAGCTAAAGCATTTGTGGAATAAGGATCCTCAAGGAAATATCCAATTTCAAAACCTGATTAAGGTAAAAGCTGCTAAATGTCAAAGCCTAAAACATGTCTTTCCACTGTCTGTGGCCAAAGACCTTGTGCTTCTCCAACTCCTTGAGATAAGTGATTGCGGAGTAAAGGAAATTATTGCAAATGATCAAGGAGAGGTAGAGGCAGCAGCTCTTGGCTTTGTTTTCCCAAAACTAGTATCCATAAAGTTTTTAAATTTGCCAGAACTTCGATACTTTTGTACCGGAAATCACAACCTCAGATTTCCGTTATTGAATAAGTTATATGTTGTTGAGTGCCCTGCAATGGAGACTTTCTCTCAGGGAATCTTAAGGGCATCAATCCTTAGAAAGATATATTTGACTCTGGAAGGAGATCAGGTGTACTGGGAAGGTGACCTTAATGCTACTATACGAAAGCTTTACGATAGAGATCTCCAAGCAAGATTAAGCATTTCATAG 3858 0.4368 MDAIASVASNVAAPLLKHLTYVLMYSTYLNQLETELQRLQHEEKEVRHTVEAAKRSGEEIEDTVLDWFGRVRAAVEEGQAFLRGEDEDRVGCMDVYSRYMKSQRAKELVDNVREMRNESFDQVSYRCALRCNVGPAAREYVELESRTKMLSDVLRVLEDGMVDIVGIYGMAGVGKTALVKELAWQAETEGLFDAVVMATVTNSPDVGMIRAEIADGLGLKFDELTELGRASRLRQRIRQEQRVLVILDDVWGKLELTQVGVPFGENKRGCKCQLLVTSRDVNVLNTNFEVDRVYRLEALSEGESWKLFEKRRGDDSVKDASIQPVAEKLAKSCGGLPLLIVTVVEAMKNQDLYAWKDALEQITTFELEGCFYSPVCSAIELSYDHLESHELKTFFLLLGSMGSGCTTRDLLVFGWCLGLHKHVYTLADGRNRLYKLIDDLRAASLLLDEGQRDSVAALDVVRRVAASISSRVKPFFTVQRNTELKEWPRVDLLRTCHHIFLDWCYIRELPEVLECPKLKILKLNIQGNSLKIPDNFFVQMQELKVLSLGGLNCTPSLPPSLSLLTNLQGLYLCKCMLEDIAIVGEITSLEILNLEKSEIRELPTEIGGLSNLKLLDLTDCSTLGVIPHNVISSLTSLEELYMGNCDVQEEVNGSKSKSQSIDSCLNELRHLSQLTTLNVQIEDTSIFPRDLLGFGRLESYKILIGDGWKWSAVESGNYETSRLLKLNLGADPSILMDYGIKMLMAKAEDLYLAELKGVREVLYELNDEGFSQLKHLNILNCAEMESIIGSTEWAYRDHAFPKLESLILHNLVNMERICSDPLPAQAFTKLQVIKVKGCDRMEFVFSHSMVKHLSELVEIEISECKCMTNIIAEQRQEDADAGQTDKIRLVKLRSLTLECLPSLVSLSPESSSEATENGNDFSTQLFNDKVEFPNLETLKLYSINIHKIWNHQHSYFQNLTSLTVDGCNRLTRVFLYSVATKLVKLEHLLISSCKSVEKIFVSDENLSHHHHFRKPDPTELVPIFPNLETFVISEMDNLKSIWPEQLTENSFCKLKKMEITSCNNLLNVFPCHMLDKLQSLESLDLQNCMALEVVYEIDGINTEQGGLNIPLKTMSLGNLPKLKHLWNKDPQGNIQFQNLIKVKAAKCQSLKHVFPLSVAKDLVLLQLLEISDCGVKEIIANDQGEVEAAALGFVFPKLVSIKFLNLPELRYFCTGNHNLRFPLLNKLYVVECPAMETFSQGILRASILRKIYLTLEGDQVYWEGDLNATIRKLYDRDLQARLSIS 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1086 1285 SUPERFAMILY RNI-like 889 1092 - -
Aed5g1086 1285 PANTHER - 1 1252 - -
Aed5g1086 1285 CDD AAA 167 297 - -
Aed5g1086 1285 Gene3D Ribonuclease Inhibitor 762 1259 IPR032675 -
Aed5g1086 1285 Gene3D - 118 291 IPR027417 -
Aed5g1086 1285 Gene3D - 298 387 IPR042197 -
Aed5g1086 1285 SUPERFAMILY L domain-like 490 868 - -
Aed5g1086 1285 Coils Coil 25 56 - -
Aed5g1086 1285 PANTHER DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) FAMILY PROTEIN 1 1252 - -
Aed5g1086 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 397 IPR027417 -
Aed5g1086 1285 Pfam NB-ARC domain 148 384 IPR002182 GO:0043531
Aed5g1086 1285 Gene3D Ribonuclease Inhibitor 459 728 IPR032675 -
Aed5g1086 1285 PRINTS Disease resistance protein signature 333 347 - -
Aed5g1086 1285 PRINTS Disease resistance protein signature 237 251 - -
Aed5g1086 1285 PRINTS Disease resistance protein signature 607 623 - -
Aed5g1086 1285 PRINTS Disease resistance protein signature 164 179 - -
Aed5g1086 1285 SUPERFAMILY L domain-like 1021 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1086 Aed-Chr5 9131845 9137881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1086 165 440 WRKY Transcription Factor Family AT5G45050 27.946 9.91e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1086 - - gmx:100814903 2227.98