Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1081 ATGACGTCCACCTCTGTAGCAAACTACTCGATCGTGTCCAACAACGACGAGTTTTACTTAACATACAGCGTGATGGATAAGTCGCTGAGTTTAAGGACTGTAATCAATCAAACAGAGTATCTCCGTCTTCCCATGATTTGGAACAAAGACAGGCTCGCGTGGACGGTGTACGCCAAGGTTCCGAGTGATTTCTGCGACAACTACAACACCTGTGGCGCGTTTGCTATTTGTGTCATTGGTGATTCTCCTTTGTGCAGCTGTTTAGATGGATTCAAGCCGAAATCGCCCCGGAATTGGACACATGGTTATATGGCACCTGAATATGCTTTTGATGGAATATTTTCCATTAAATCAGACGTGTTTAGCTTCGGTGTATTATTGCTAGAGATAGTAAGTGGCAAGAAAAATAGCAGCATGTTCTATCCAAATGACAACAATAATCTTATTGGGCATGTAAGTGATATAATTAACTTCAATTTCTTTTCATATAATGGAACGATAGATAACCATTGTTTCAAAATGTTTAGGCATGGAGGTTGTGGAAAGAAGAAAAGTCAAAGCAATTCATTGATGCTAGTTTGCAGAACTCGTGCATTCTTTTTGAAGCTTTTCGTTGCGTTCATATTGGTCTTTTATGCGTGCAACATCATCCTAATGATAGGCCAAACATGGCATCTGTGGTCATGTTGTTGA 693 0.4026 MTSTSVANYSIVSNNDEFYLTYSVMDKSLSLRTVINQTEYLRLPMIWNKDRLAWTVYAKVPSDFCDNYNTCGAFAICVIGDSPLCSCLDGFKPKSPRNWTHGYMAPEYAFDGIFSIKSDVFSFGVLLLEIVSGKKNSSMFYPNDNNNLIGHVSDIINFNFFSYNGTIDNHCFKMFRHGGCGKKKSQSNSLMLVCRTRAFFLKLFVAFILVFYACNIILMIGQTWHLWSCC 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1081 230 Pfam S-locus glycoprotein domain 3 95 IPR000858 GO:0048544
Aed5g1081 230 Pfam Protein tyrosine and serine/threonine kinase 78 137 IPR001245 GO:0004672|GO:0006468
Aed5g1081 230 Gene3D Transferase(Phosphotransferase) domain 1 64 177 - -
Aed5g1081 230 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 94 - -
Aed5g1081 230 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 100 153 - -
Aed5g1081 230 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 3 94 - -
Aed5g1081 230 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 100 153 - -
Aed5g1081 230 SUPERFAMILY Protein kinase-like (PK-like) 78 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1081 Aed-Chr5 8927709 8930845 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1081 100 163 Receptor kinase-like Gene Family AT4G23130 55.385 4.73e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1081 S_locus_glycop 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1081 - - gsj:114378841 149.443