Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1075 ATGAGAGGAGCAGAAAAGTTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGCATACCAGATCAAAAGCCTAACCCCATCTATGCTTTCAACTACATATCCAACAAGGATGAGAAGTACTACACTTATAGCCTGGAGAATGATTCTGTGATCTCAAGATTGGTAATGAATCAAACCACTTCTATGAGTACTCGGTACGTTTGGATGGAGGATGAGCAATACTGGAAGGTCTATAAATCGCTGCCAAAAGACAACTGTGACTACTATGGCATATGTGGAGCCTATGGGACTTGCATTATCACAGGCTCCCAAATATGTCAATGCTTAGATGGCTTCAGTCCCAAGTCACCTCAAGCATGGAACTCGTCTGACTGGACTCAAGGATGCGGGAACAAAAAGGATACAGGAAGAAGTGGCTACATGGCACCAGAATATGCAGCTGATGGACTTTTTTCTGTGAAATCTGACGTTTTCAGTTTTGGTATTTTGTTGTTAGAGATTATAAGTGGAAAGAGAAACAGAGGTTTTTATCTTGAAAGCCAATTTCCTAATATAGTAACTCATGTAAGTATAACTATTTTCTTCCAATTGCTTTGA 603 0.403 MRGAEKFVRIGPWNGLHFSGIPDQKPNPIYAFNYISNKDEKYYTYSLENDSVISRLVMNQTTSMSTRYVWMEDEQYWKVYKSLPKDNCDYYGICGAYGTCIITGSQICQCLDGFSPKSPQAWNSSDWTQGCGNKKDTGRSGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRNRGFYLESQFPNIVTHVSITIFFQLL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1075 200 Gene3D Transferase(Phosphotransferase) domain 1 99 194 - -
Aed5g1075 200 ProSiteProfiles EGF-like domain profile. 84 120 IPR000742 -
Aed5g1075 200 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 128 191 - -
Aed5g1075 200 SUPERFAMILY Protein kinase-like (PK-like) 137 175 IPR011009 -
Aed5g1075 200 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 128 191 - -
Aed5g1075 200 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 133 - -
Aed5g1075 200 Pfam Protein tyrosine and serine/threonine kinase 137 174 IPR001245 GO:0004672|GO:0006468
Aed5g1075 200 Pfam S-locus glycoprotein domain 9 118 IPR000858 GO:0048544
Aed5g1075 200 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1075 Aed-Chr5 8808241 8810856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1075 134 193 Receptor kinase-like Gene Family AT4G23130 55.738 3.20e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1075 S_locus_glycop 7.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1075 - - gmx:100775648 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1075 5 8808241 8810856 Aed5g1075 5 8808241 8810856 ECH