Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g1075 | ATGAGAGGAGCAGAAAAGTTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGCATACCAGATCAAAAGCCTAACCCCATCTATGCTTTCAACTACATATCCAACAAGGATGAGAAGTACTACACTTATAGCCTGGAGAATGATTCTGTGATCTCAAGATTGGTAATGAATCAAACCACTTCTATGAGTACTCGGTACGTTTGGATGGAGGATGAGCAATACTGGAAGGTCTATAAATCGCTGCCAAAAGACAACTGTGACTACTATGGCATATGTGGAGCCTATGGGACTTGCATTATCACAGGCTCCCAAATATGTCAATGCTTAGATGGCTTCAGTCCCAAGTCACCTCAAGCATGGAACTCGTCTGACTGGACTCAAGGATGCGGGAACAAAAAGGATACAGGAAGAAGTGGCTACATGGCACCAGAATATGCAGCTGATGGACTTTTTTCTGTGAAATCTGACGTTTTCAGTTTTGGTATTTTGTTGTTAGAGATTATAAGTGGAAAGAGAAACAGAGGTTTTTATCTTGAAAGCCAATTTCCTAATATAGTAACTCATGTAAGTATAACTATTTTCTTCCAATTGCTTTGA | 603 | 0.403 | MRGAEKFVRIGPWNGLHFSGIPDQKPNPIYAFNYISNKDEKYYTYSLENDSVISRLVMNQTTSMSTRYVWMEDEQYWKVYKSLPKDNCDYYGICGAYGTCIITGSQICQCLDGFSPKSPQAWNSSDWTQGCGNKKDTGRSGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRNRGFYLESQFPNIVTHVSITIFFQLL | 200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g1075 | 200 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 194 | - | - | |
Aed5g1075 | 200 | ProSiteProfiles | EGF-like domain profile. | 84 | 120 | IPR000742 | - | |
Aed5g1075 | 200 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 128 | 191 | - | - | |
Aed5g1075 | 200 | SUPERFAMILY | Protein kinase-like (PK-like) | 137 | 175 | IPR011009 | - | |
Aed5g1075 | 200 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 128 | 191 | - | - | |
Aed5g1075 | 200 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 1 | 133 | - | - | |
Aed5g1075 | 200 | Pfam | Protein tyrosine and serine/threonine kinase | 137 | 174 | IPR001245 | GO:0004672|GO:0006468 | |
Aed5g1075 | 200 | Pfam | S-locus glycoprotein domain | 9 | 118 | IPR000858 | GO:0048544 | |
Aed5g1075 | 200 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 1 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g1075 | Aed-Chr5 | 8808241 | 8810856 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g1075 | 134 | 193 | Receptor kinase-like Gene Family | AT4G23130 | 55.738 | 3.20e-15 | 71.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aed5g1075 | S_locus_glycop | 7.6e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g1075 | - | - | gmx:100775648 | 269.24 |