Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1055 ATGGGTGAAAAGCTATCGGCTATTGTGATAAATTGTTTTCCGCTTGTTTCCCCCGAAACGTCCCTTGTGAAAAGCGTAGAGAGATCGGAAAAGAGGAATGCACAGGCTATCGGGCACAAGAAAATTAAAATAAAACTTGTAACCAGCATTGCTGCAGCTTCAGGAATGCTTTTACTCGGTATTTATTTTATCTGCAGAATCTGGAGGGGCATTAATGAGTATGCTGTTGATGGGCAATTTTCTGTAAAATCTGATGTCTTCAGCTTTGGTATTTTACTGTTGGAGATAATATGTGGGAAAAGAAATAGAGGACGAGTTCATGGAAAACAATCACTTAACCTGATTGATCATTTGACATCATATGTACATTTCTCTTTTATTGTAATAACAATTTTCTGTTTTCTTTAA 408 0.3652 MGEKLSAIVINCFPLVSPETSLVKSVERSEKRNAQAIGHKKIKIKLVTSIAAASGMLLLGIYFICRIWRGINEYAVDGQFSVKSDVFSFGILLLEIICGKRNRGRVHGKQSLNLIDHLTSYVHFSFIVITIFCFL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1055 135 Pfam Protein tyrosine and serine/threonine kinase 73 115 IPR001245 GO:0004672|GO:0006468
Aed5g1055 135 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 73 120 - -
Aed5g1055 135 Gene3D Transferase(Phosphotransferase) domain 1 21 126 - -
Aed5g1055 135 SUPERFAMILY Protein kinase-like (PK-like) 73 119 IPR011009 -
Aed5g1055 135 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 73 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1055 Aed-Chr5 8458341 8462489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1055 73 117 Receptor kinase-like Gene Family AT4G23230 55.556 1.34e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1055 PK_Tyr_Ser-Thr 1.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1055 - - gmx:100808807 78.9517