Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1054 ATGAAGTTTATTCTTTCTCTAATGAGTATCATACTTTATACACTTTTTGTCTCTTCTCTTGTAGTTCCCATAGCAGCGGACACAGACACACTATCCAATTCACAGTTCCACTCCCTCAGTTATGGAAAGACTATAAATTCCACAAATGGAATCTTCGAACTTGGTTTTTTCCATCTTGGAAATGCCAACAAAAGCTACCTCGCAATTCGGTACAAAAGATACCTGGATGGAACCTTTCTTTGGGTTGCAAACGGTGCCAAACCAATCAATGACTCCTCAGCCATGTTGAAACTAAACAGTTCTGGCAGTTTGGTCCTTACACACAACAACAATGAGGTTTGGTCCACAAGTTCTCCAAAAGTGGCACAGAATAATGCAGTGGCAGAGCTATTAGACTCTGGCAACCTTGTGATAAGAGAGAAGATCAATGAAGCAAAGCCAAAAGAGGAAGAAGAATATCTATGGCAAAGTTTTGATTACCCTTCTAACACAATGTTGGCAGGGATGAAGATTGGATGGGACCTCAAAAGGAAAACAAGTAGAAGTCTAATAGCTTGGAAGAGTGATGATGATCCAACCCCAAGTGACTTATCATGGGGTGTTTTGTTGAATCCATATCCTGAGATCTATATGATGAAGGGAAAAACTAAGTACCACCGACTTGGACCATGGAATGGGAAACGCTTCAGTGGCATGCCAGAAATGAAGCCTAATCCTGTTTTCAATTACAAGTTCATCGTCAACCAGGACGAGGTTACCTACATGTGGACATTGCAGACTGATCTGATCACAAAAGTGGTGCTCAACCAAACCATGCAGGAACGTCCTCGCTATGTGTGGTCCAAGGCCGTTGGATCTTGGAACTTCTACTCAACCATGCCGGGAGAGTACTGTGACCTCTATGGCGTCTGCGGGGCCAATTCCTTTTGCAGCTCCACTGCATCACCAATGTGTGACTGTCTGAGAGGGTTCAAGCCTTTGTCTCCTGAGAAATGGAACTCAATGGTTTGGTCACAAGGGTGTGGCTTGAAAAGTCCATTGACTTGCAACTTTGATGGATTTGTTCCTATTGATGGCTTGAAAGTGCCAGATACTCAAAATACTACTGTGGATCATAGTATTGATCTTGAGCAGTGCAGAACCAAGTGCTTGAAAAGTTGTTCCTGCATGGCATATGCAAATTCTAATATAAGTGATTCAGGAAGTGGCTGTGTCATGTGGTTTGGTGATTTACATGACATCAAACTGTATCCAGTTCCAGAAAGTGGAGAACGTCTATATTTAAGGTTGCCTCCTTCAGAGTTAGTTTCTACAAAGCACAAGGCGTCTATCATAATATATGTAACCGCTGCTGCAGCTATAGGAGTTATACTTGCTGTTTATTTTCTCTACAGAAGGAAAATTTATGAGAAATCAATGGCAGAATATAAGTATGAAAGTTATGTGAATGATCTGGAGCTCCCATTGCTTGATTTGTCAGTAATCACTGCAGCCACAAATAACTTTAAGGGGAACAAGATTGGAGAAGGTGGCTTTGGATCCGTATATAGGGGAAAATTAGCCAGTGGGCTAGAAATTGCTGTGAAGAGACTTTCAAAGAACTCGAATCAAGGAATGAGTGAGTTCGTCAACGAAGTAAAATTGATTGCAAAGGTTCAACACCGAAATCTTGTGAAGCTTCTTGGTTGCTGCATTCAGAAACGAGAGAAAATGCTAGTTTATGAGTACGTGGTTAATGGCAGCCTTGACTACTTCATTTTTGATAGTACCAAAGGGAAATTGCTAGATTGGACAAAGCGTTTCAACATAATTTGTGGAATTGCTCGGGGACTTATGTACCTTCATCAAGATTCTCGATTAAGGATTATACACAGAGATCTCAAAGCAAGCAATGTTTTACTAGACGAAACTTGGAATCCAAAAATTTCAGACTTTGGTACCGCTAGAACTTTTGGAGGAGAGGATATTCAAGGAAACACAGAAAAAATTGTTGGAACATTTGGTTACATGGCACCAGAATATGCTATTGATGGCCAATTTTCTACAAAATCTGATGTCTTCAGCTTTGGTGTTTTGCTGTTGGAGATTATATGTGGGATGAAAAGTAGACGTTATAGTGGAAAGCAAATCATTAACCTTGTTGATCATGTGTGGAGTATCACCAACTATGGAAAACTGAACCATGAAGAAGTTATCAGCAGGAACAAGAAGAACTATAATGTAGTAATTGTAACCTCTCTTGCTGTAACTTTAGGTGGTTTACTTGCTATTTATTTCATCTACAGAAGGAAAATTGCTGATAAGTCAAATGAAGAAAATAACCATGGAAAGCCTCGACCCCAACATGGACACAGCCGAAGCATTAATATTGAACCTATCAGGGACAAGAAGAACTCTAAAATAATAATTATTGTAACATCCGTTGCTGCAGCTTTAGGAGTTATACTTGCTCTTTATTTCATCTACAGATGGAAGATTGCCGAGAAGTCAAATGAAGAAAATAACTATGAAGAGCCTCACCACCAACATGGACACAACGGAAGCATCAATATTGAGTCTATTAGGCACAAGAAGAACTCTAAAATAATAATTGTAACCTCTGTCCCTGCAACTTTAGGTGTTATACTTGCTATTTATTTCGTCCACAGAAGAAACATTGCCGATACTCTAGCAGAGGTTGAGCTGAAGATATTTGGCCAAGGTCGAATAGAAGAGTCTATCAGGGACAAGAAGAACTCAAAAATAGTAATAATTGTAACTTCCATCGCTGTAACTTTAGGAGTTATACTTTCTATTTATCTCATCTACAGAAGGAAAATTGCAGAGAAGTCAAATGCAGAAAATAACCATGAGGAGTCTCTGCCCCGACATGGACACAACCGATGGAACATTGCTGTTACAGAAGAGTAG 2910 0.399 MKFILSLMSIILYTLFVSSLVVPIAADTDTLSNSQFHSLSYGKTINSTNGIFELGFFHLGNANKSYLAIRYKRYLDGTFLWVANGAKPINDSSAMLKLNSSGSLVLTHNNNEVWSTSSPKVAQNNAVAELLDSGNLVIREKINEAKPKEEEEYLWQSFDYPSNTMLAGMKIGWDLKRKTSRSLIAWKSDDDPTPSDLSWGVLLNPYPEIYMMKGKTKYHRLGPWNGKRFSGMPEMKPNPVFNYKFIVNQDEVTYMWTLQTDLITKVVLNQTMQERPRYVWSKAVGSWNFYSTMPGEYCDLYGVCGANSFCSSTASPMCDCLRGFKPLSPEKWNSMVWSQGCGLKSPLTCNFDGFVPIDGLKVPDTQNTTVDHSIDLEQCRTKCLKSCSCMAYANSNISDSGSGCVMWFGDLHDIKLYPVPESGERLYLRLPPSELVSTKHKASIIIYVTAAAAIGVILAVYFLYRRKIYEKSMAEYKYESYVNDLELPLLDLSVITAATNNFKGNKIGEGGFGSVYRGKLASGLEIAVKRLSKNSNQGMSEFVNEVKLIAKVQHRNLVKLLGCCIQKREKMLVYEYVVNGSLDYFIFDSTKGKLLDWTKRFNIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDETWNPKISDFGTARTFGGEDIQGNTEKIVGTFGYMAPEYAIDGQFSTKSDVFSFGVLLLEIICGMKSRRYSGKQIINLVDHVWSITNYGKLNHEEVISRNKKNYNVVIVTSLAVTLGGLLAIYFIYRRKIADKSNEENNHGKPRPQHGHSRSINIEPIRDKKNSKIIIIVTSVAAALGVILALYFIYRWKIAEKSNEENNYEEPHHQHGHNGSINIESIRHKKNSKIIIVTSVPATLGVILAIYFVHRRNIADTLAEVELKIFGQGRIEESIRDKKNSKIVIIVTSIAVTLGVILSIYLIYRRKIAEKSNAENNHEESLPRHGHNRWNIAVTEE 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1054 969 CDD B_lectin 38 161 IPR001480 -
Aed5g1054 969 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 38 751 - -
Aed5g1054 969 Gene3D Transferase(Phosphotransferase) domain 1 577 748 - -
Aed5g1054 969 Pfam D-mannose binding lectin 78 187 IPR001480 -
Aed5g1054 969 SMART ntp_6 349 430 IPR003609 -
Aed5g1054 969 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1054 969 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Aed5g1054 969 Pfam Protein tyrosine and serine/threonine kinase 504 702 IPR001245 GO:0004672|GO:0006468
Aed5g1054 969 SMART blect_4 36 161 IPR001480 -
Aed5g1054 969 MobiDBLite consensus disorder prediction 770 790 - -
Aed5g1054 969 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 751 - -
Aed5g1054 969 Gene3D Phosphorylase Kinase; domain 1 465 576 - -
Aed5g1054 969 Pfam S-locus glycoprotein domain 220 326 IPR000858 GO:0048544
Aed5g1054 969 Pfam PAN-like domain 349 414 IPR003609 -
Aed5g1054 969 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 192 IPR036426 -
Aed5g1054 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Aed5g1054 969 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Aed5g1054 969 CDD PAN_AP_plant 346 431 - -
Aed5g1054 969 SMART serkin_6 501 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1054 969 SUPERFAMILY Protein kinase-like (PK-like) 477 714 IPR011009 -
Aed5g1054 969 ProSiteProfiles PAN/Apple domain profile. 349 431 IPR003609 -
Aed5g1054 969 Gene3D - 24 158 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1054 Aed-Chr5 8427867 8457808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1054 442 701 Receptor kinase-like Gene Family AT4G23190 55.094 1.58e-92 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1054 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1054 - - gmx:100810407 1190.25