Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1037 ATGACTAGTTCAGCAGGAATCCCTTGCACATCATCATCTTATCCTCCTATTTCACCAATACCCAACCGGTTGCTTGGATCCTTGAAATTTGACATAGGAAACTCACCTAATTCAGCCCTTTCTAATCATTTTGATTCTGATACTGTTTCTTCTGCATTAAGTGACAGCCAAGAGCAGCACACCTCTGGCGAAATTCACTCCTGTAACTCTTTGCATGAAACCAATCACTATTTGCACAGACCAGTCTCATCTGTGGACCATCTATCTACTAGGAGCTTTTTTCCACAGGATGCAAGTTATTACCATGAAACCAGACATGCATTGCTGGAATTAGAAACTGCTTTGATGGAACCTGATGGTGAAGATCAAGTCAACACATCAAGAACTTCTTTGGGTGTTAGCAATAAGCCAATAACATCTGGCCAAAGAAATAAGTCCTGGAGCCATGAGGGCCAGTCAAGTGATGTTGCACATACAGAGAAGCGTCACAAATCAATGGAGGCAGTGTCACTACAAGGATTCTCATCGAGCAATTTGAAACAATTGCTGATTGTATGTGCCAAAGCCTTGTCTGAAAACAACATCAAAGGTTTTGATGAGTTGATAGAAAAGGCTAGAAGTGCTGTGTCCATTACTGGGGAGCCAATCCAACGCCTTGGTGCTTACTTGGTAGAAGGGCTTATTGCAAGGAAGGAGGCATCAGGGAATAACATCTACCATGCCCTAAGATGCAGAGAGCCTGAGGGAAAAGACTTACTCTCTTACATGCAGCTACTGTATGAAATCTGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCTATTGCTGAAGCTTGTAGGAATGAGGACCGCATTCATATCATAGACTTTCAGATTGGTCAGGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCTCCCCACGTGCGGATCACAGGGATTGATGATCCTCTTTCTAAGTATGTCCGTGGTGATGGATTGGAAGCTGTTGGTAAAAGGTTGTCTGTGATCTCTCATACATTTAACATCCCAGTCGAGTTCCACAGCATGCCTGTTTTAGCTCCAGATGTGACAAAAGACATGCTTGATGTTAGGCCTGGTGAGGCTTTGGCTGTGAACTTCCCTTTGCAACTCCATCACACGGCTGATGAGAGTGTTGATATGAGTAATCCAAGGGATGGACTCTTGAGATTGGTGAAATCACTTTCTCCCAAGGTGACTACATTGGTAGAGCAGGAGTCAAACACAAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGAATTACTACTTGGCTATGTTTGAGTCCATTGATGCATCTCTTCCAAGGAAGAGCAAGGAGTGGATTAATGTGGAGCAACATTGTTTGGCTCGGGATATAGTCAACATTATTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACACGAGCTGTTAGGCAAGTGGAAGTCTAGGTTAACAATGGCTGGCTTTCGTCAATATCCTTTGAGTTCTTATGTCAATTCTGTCATAAGAAGCCTTCTGGGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGCTAGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCTTGGCATTGA 1650 0.4352 MTSSAGIPCTSSSYPPISPIPNRLLGSLKFDIGNSPNSALSNHFDSDTVSSALSDSQEQHTSGEIHSCNSLHETNHYLHRPVSSVDHLSTRSFFPQDASYYHETRHALLELETALMEPDGEDQVNTSRTSLGVSNKPITSGQRNKSWSHEGQSSDVAHTEKRHKSMEAVSLQGFSSSNLKQLLIVCAKALSENNIKGFDELIEKARSAVSITGEPIQRLGAYLVEGLIARKEASGNNIYHALRCREPEGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIGQGTQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLSVISHTFNIPVEFHSMPVLAPDVTKDMLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLNYYLAMFESIDASLPRKSKEWINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLGCYSEHYNLVEKDGAMLLGWKDRNLISASAWH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1037 549 ProSiteProfiles GRAS family profile. 170 549 IPR005202 -
Aed5g1037 549 MobiDBLite consensus disorder prediction 118 162 - -
Aed5g1037 549 MobiDBLite consensus disorder prediction 120 153 - -
Aed5g1037 549 Pfam GRAS domain family 179 548 IPR005202 -
Aed5g1037 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 549 IPR005202 -
Aed5g1037 549 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1037 Aed-Chr5 8215396 8217045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1037 102 548 GRAS Transcription Factor Family AT5G48150 56.473 3.27e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g1037 GRAS 6.7e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1037 - - gmx:100775665 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0699 1 8200626 8202326 Aed5g1037 5 8215396 8217045 PCT