Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1036 ATGAGAGAGGAGTCATTAGGACTGATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTGGTTTTGGCAATTTTTGCATTCTTCTGCCATAGGTATCATCGGAAGCGATCGCAGATCGGCAATAGCAGTTCTAGAAGAGCTGCTACCATACCAATCCGCACAAATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCAAGAATCACCCATAAAGTCAGGAAGACATGGCATGCCCTTTTGGCTTGATGGTTTTAAGAAGAGTAGTAGCATGATCCCAGCATCTGGACTACCCGAATATGCATACAGGGATTTGCAGAAAGCAACACATAATTTCACCACAGTCATTGGACAAGGTGCATTTGGTCCTGTTTACAAAGCTCACATGCCTACGGGTGAAATTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAGTTTCACACAGAGGTCATGCTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTATACATGAGTAACGGTGATGTTAATGAAGCACTGTGCTGGGACTTGAGGGTTCACATAGCTTTAGATGTGGCAAGAGGCTTGGAGTATCTTCATAATGGGGCAATTCCTCCTGTAATCCATAGAGATATCAAATCTTCCAATATTCTGTTGGACCAATCCATGAGAGCCAGGGCAGCAATGAACACAGAGGGAAAAGTAGGGTGGGAGGAAATTGTGGACTCTCACCTTCAAGGAAACTTTGATATCAAGGAACTCAATGAAGTGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTTTTAACAAGGATCCTTAAATCAAGAAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACAATGATCAGCTAGAGAACAAGGTTTCTGTTGTTACTGACCACAGGAGAGGAGAATCTTTGGATAGTGTAGTAGAGGTTGTATGA 1053 0.4274 MREESLGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGQESPIKSGRHGMPFWLDGFKKSSSMIPASGLPEYAYRDLQKATHNFTTVIGQGAFGPVYKAHMPTGEIVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGDVNEALCWDLRVHIALDVARGLEYLHNGAIPPVIHRDIKSSNILLDQSMRARAAMNTEGKVGWEEIVDSHLQGNFDIKELNEVAALAYKCINRAPSKRPSMRDIVQVLTRILKSRSHHKNSLSATDEVFIDNDQLENKVSVVTDHRRGESLDSVVEVV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1036 350 SMART serkin_6 113 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1036 350 SUPERFAMILY Protein kinase-like (PK-like) 90 300 IPR011009 -
Aed5g1036 350 Pfam Protein kinase domain 117 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1036 350 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Aed5g1036 350 Gene3D Transferase(Phosphotransferase) domain 1 247 329 - -
Aed5g1036 350 Gene3D Transferase(Phosphotransferase) domain 1 188 246 - -
Aed5g1036 350 PANTHER OS01G0253100 PROTEIN 245 325 IPR045271 GO:0004714|GO:0006468
Aed5g1036 350 PANTHER OS01G0253100 PROTEIN 8 246 IPR045271 GO:0004714|GO:0006468
Aed5g1036 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Aed5g1036 350 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 245 325 - -
Aed5g1036 350 ProSiteProfiles Protein kinase domain profile. 113 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1036 350 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 8 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1036 Aed-Chr5 8200018 8206046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1036 103 246 Receptor kinase-like Gene Family AT5G37450 52.597 1.58e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aed5g1036 Pkinase 3.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1036 - - gmx:100785634 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0700 1 8214581 8219939 Aed5g1036 5 8200018 8206046 PCT