Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1033 ATGGGAATTCAAAAACATATGGTTAGTATAAAGGTTAGCTTTGGTGTTCTCTTGGTTCTTCTTCTTGTGGCAGCAGCCAGTTCTATAGAAAAGAAGGAAACGGAAGATGGTTTTGTTAGCGAGTTACTTGATCCAGCATCTGGATTGGTTGATGAGCACACGCCAAAGCTCTTGTGGAAATATTGCTGGGAAGATTTATTTCATTTAATGAGAGATGTTGAGGATCATGATTTATGCCTCACACGGGAATTGTCTGAAAGCACCAATATAATCAGTTCAGAGATTCAACCATTAGCACAAGAAGAAGTCCAACAGTTTATCAATGCTTACTGCCCTCAATTCAAGAAGAACTTTCTTCATTGTTTGAGGAAAAGTAATCTTCCATTACCTCTCTCAGGAAAAGAGGATGATTCCAAGATTTGGCATGTGAGTTATATGAGGCCACTTTTTTCCCGATCAAGTGATCCTGAAAAAAAAATAGGTCGTATTTTGCTCCAGCACCTATCAGAACCACCTAGTCCAGGCCCTGCAGTTGGATCACCTACACCCAGTTTAACACGATCTCCTGAATCCAGTCCAGCACCATCATCTGAACCCAGTCCAGCCCCATCACCTCTTGCTCCAGCACCTCTAGTTCATAGACCTCCGCATTTCTCTTCACCACCGACATCACCATTTTTCCCAAAATTGACGCCACCAGCAGCTTCAGAAATTTCTTCTCCTCCATCTTCTGACATTAACAAACAGGAAGATAAAAGTAGTAATAAAAGAACAGTTGTTATCGCTGTAGTTATAACTGCATTGGTGACATTTATTGCTGCAGCACTGCTCTTTTTATGCTGTAGTCGGTACCATAAGACTGGCCATGTTAGACTAAATGATGATAGGCCTCTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTTTTCTTTCGGAAATTCAATAAAAGGGGAGAAAGTTGGATTTCAGTCATCAAGTAATGGTTTAGTAGACAATAAGAAGTACTCAGTGCAGGAAAGTCAATCAATAGGAGCTTTTAATGCTGCTGCCGGATCACCATTTGAACTGAAACCTCCTCCTGGGAGGGTGGGAATCATCGCTTCTGGAATTCCTCCTTTAAAACCTCCTCCGGGCAGGCTAAACCCTCTTCCTCCGGAGCCACCTTCATTTAGGCCTTCTGGTGATCCTGCTCCGGCTGCTACTGCTGCTGTTGCTGCAGCTCCTCCTCATGCCCCTCAACAGCCTACTATTAGTAGCAATCGACCACCACCACGACCACCAGCTGGTGCCAAACCTGGCCCACCTCTACCACTACCACCAGCACTAGCTGGTGTCAGACCTGGTCCTCGTCCTCCACCACCTCCAGCACCAGTTGGTGCCAAACCTGGTCCTCGTCCTCCACCACCTCCAGCACCAGTTGGTGCCAAACCTAGTCCTCCACCACCACCCCCAGTGTCAGCTGGTCCCAAACCTGGTCCTCCTCCACCACCACCCCCTGCATCAGCTGGTCCTCGTCCACCACCACCCCCAGTGTCAGCTGGTCCCAAACCTGGTCCTCCTCCTCCACCACCCCCTGCACCAGCTGGTCCTCGTCCACCAACACCTCCAATGAGTGGTGTGGCTCCTCCTCGACCTCCGCCCCCGTTTGGCTCAAAGGTGTCATGGCCTTTAGCTAGTGGATTGAAAGCTACTGTTGAAGCTGGTGTAGAAGGTGAATCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCAGACCAATCAATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTCAAAAACAGAAACAGTCTTCCTCCCAAGACCCTTCACCACTGTTTGTCCAGATCATTGACAAAAAGAAAGCGCAAAACTTGTTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGACATGAGCTGCCCCCGGAATTCCTTCAAACTTTGCTGAAGATGGCACCGACATCTGACGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATATATCTCAACTTGGGCCTGCTGACCGTTTCCTGAAAGCCATGGTTGACATTCCATTTGCATTTAAGCGAATGGAAGCTCTGCTTTTCATGGGCTCACTTAAAGAGGAGCTTGCATTTACTATGGAGTCTTTTGCTATTCTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGTTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGTTGGAACATTCCGTGGTGGTGCACAAGCCTTTAAACTTGATACACTTCTGAAATTATCCGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACATTTTGTTGTTCTAGAGATTATCCGCTCTGAGGGCATAAAAGCCATCCGAAAGGAAAAAGAGAGCCAGAGTTCATCTAGTATTAAATCAAACGACCTTCACGATAGCACTCAAGAAACAGAAGATCGCTACCATGAAATTGGTCTTCAGGTGGTTTCGCATTTGAGCAGTGAACTTGAGAATGTAAAAAAAGCAGCAATTATGGATGCTGACAGCTTAACCGGAACCACTGCCAAACTTGGCCATGGTCTCATAAAAACACGAGACTTGGTAAACAAAAGTATGAAGAGTGTGGAGGGAGATAGGGGGTTTTGTGAGACAATGAAAAGTTCTGTGCAGAATGCTGAGGCTGATGTTATGAAACTGCTGGAAGAGGAGAAGAAAATAATGGCTTTGGTGAAGAGCACTGGTGATTACTTCCATGGGAATTCTGGGAAAGATGAAGGCATAAGGTTGTTCATCGTGGTACGAGACTTCTTAATAATGCTGGATAAGGTGTGCCAGGAGGTGAGAGATACACAGAAGAAGCGAGCAAGAACACTAAAACAAGAGACTCCTCGAGGAGCATCTTCATCTGAAACACGTCCACCACCTGATTTTCGTCAGCGGCTTTTTCCAGCAATTGCTGAAAGGAGGATGGATGACATTAGTTCAGACGATGAGAGTCCATAG 3120 0.4551 MGIQKHMVSIKVSFGVLLVLLLVAAASSIEKKETEDGFVSELLDPASGLVDEHTPKLLWKYCWEDLFHLMRDVEDHDLCLTRELSESTNIISSEIQPLAQEEVQQFINAYCPQFKKNFLHCLRKSNLPLPLSGKEDDSKIWHVSYMRPLFSRSSDPEKKIGRILLQHLSEPPSPGPAVGSPTPSLTRSPESSPAPSSEPSPAPSPLAPAPLVHRPPHFSSPPTSPFFPKLTPPAASEISSPPSSDINKQEDKSSNKRTVVIAVVITALVTFIAAALLFLCCSRYHKTGHVRLNDDRPLLSLSMSDYSVGPSSFSFGNSIKGEKVGFQSSSNGLVDNKKYSVQESQSIGAFNAAAGSPFELKPPPGRVGIIASGIPPLKPPPGRLNPLPPEPPSFRPSGDPAPAATAAVAAAPPHAPQQPTISSNRPPPRPPAGAKPGPPLPLPPALAGVRPGPRPPPPPAPVGAKPGPRPPPPPAPVGAKPSPPPPPPVSAGPKPGPPPPPPPASAGPRPPPPPVSAGPKPGPPPPPPPAPAGPRPPTPPMSGVAPPRPPPPFGSKVSWPLASGLKATVEAGVEGESDAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQKQKQSSSQDPSPLFVQIIDKKKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRLFSGDISQLGPADRFLKAMVDIPFAFKRMEALLFMGSLKEELAFTMESFAILEVACKELRNSRLFLKLLEAVLKTGNRMNVGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAIRKEKESQSSSSIKSNDLHDSTQETEDRYHEIGLQVVSHLSSELENVKKAAIMDADSLTGTTAKLGHGLIKTRDLVNKSMKSVEGDRGFCETMKSSVQNAEADVMKLLEEEKKIMALVKSTGDYFHGNSGKDEGIRLFIVVRDFLIMLDKVCQEVRDTQKKRARTLKQETPRGASSSETRPPPDFRQRLFPAIAERRMDDISSDDESP 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1033 1039 PANTHER FORMIN-LIKE PROTEIN 1 473 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 834 856 - -
Aed5g1033 1039 SMART it6_source 574 994 IPR015425 -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 419 556 - -
Aed5g1033 1039 Pfam Formin Homology 2 Domain 576 979 IPR015425 -
Aed5g1033 1039 PANTHER FORMIN-RELATED 1 473 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed5g1033 1039 SUPERFAMILY Formin homology 2 domain (FH2 domain) 646 1006 - -
Aed5g1033 1039 Gene3D Formin, FH2 domain 579 1011 IPR042201 -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 374 398 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 1021 1039 - -
Aed5g1033 1039 ProSiteProfiles Formin homology-2 (FH2) domain profile. 574 1005 IPR015425 -
Aed5g1033 1039 PANTHER FORMIN-LIKE PROTEIN 470 1037 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 194 229 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 364 557 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 988 1039 - -
Aed5g1033 1039 MobiDBLite consensus disorder prediction 167 253 - -
Aed5g1033 1039 PANTHER FORMIN-RELATED 470 1037 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed5g1033 1039 Coils Coil 921 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1033 Aed-Chr5 8174602 8183167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1033 576 1030 FH2 protein (formin) Gene Family AT5G54650 67.826 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1033 - - gmx:100776210 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1033 5 8174602 8183167 Aed5g1033 5 8174602 8183167 ECH
Aed1g0708 1 8253767 8260556 Aed5g1033 5 8174602 8183167 PCT