Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1031 ATGGTCACCAAAATCCAGAACAGGCCTCCATTTTTACTCACATCCACACCTCCACCTCTTTCAAAGAGTTTTGAGGGTGATGTGCTCCTCCTAGACAAAAACAAAGAGCAACGAGTTGGAGCAGAGACAATGGTGGGGACTCCAATTAATGGAAGAACAAGGCAAGCTTTCACAGTTGTCAATGGCGGTGGCCACGATCTTAGCCCCAGTAGTGCCCCTCCAAGCAATGCTGGATCGGACTATGGTGTCATAGAGTTCACAAGAGAGGACGTGGAAGCATTGCTTAATGAGAAAGCCAAGAGAAAGGACAGATTTAATTATAAGGTTTGTATCAGATGGCTCCAAGACCTTGAGATGTACTACTCTCTAGAGCATGAAAAGTTAAAGAATTCACTGGAATTGAGTCAGCAAAAAAGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAGTTAAATTCAATTATCACAGAAATGAGAAGGAATTGCACTTCTTTGCAAGAAAAATTGATCAAGGAAGAAACTGAAAGATCGGCTGCAGTGGAAACTCTTGTTAAGGAGAGAGAAGCTAGGCTTGACATTGAGAGGTCACATAGTACACTTTCAGAGGACCTTGGAAGAGCTCAACGAGAGATGCAAAGTGCAAATCAGAAGATAGCATCACTCAATGAAATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAGTACAATGGAAAGCTTCATTCTGAGCTTTCGTCGGTTGAGGATGAACTTAAACGTGTAGAAAAAGAGAAGGCTACTGTAGTGGAGAGCATAACCATGTTAAGGGGTCAACTTACTATATCCGTTTCTTCGCAAGAAGAGGCCATAAAACAGAAGGATGTCCTGTCTACAGAAGTTTCTTCTCTAAGAGGAGAGTTGCAACAAGTAAGAGATGAGCGAGATCGGCAGTTATCTCAAGTACAAACATTAAGTTCTGAGTTAGAGAAATTCAAAGAATCTACAAAACACTCCTCCACCGAATTGGACAGCTTGACGTTAAAAGCAAATGATCTGGAGGAAAAATGTTCTTTGAAAGATACTCAGTTAAAGGCATTGGAAGAGAAGCTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCTGTGTATGAGACAAGGACAGAATATGAAGGACAGCAGAAACTTGTGAATGAGTTACAAAGACGCTTAGAAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAGTTACATAATACTATTTTGGAGCTAAAAGGGAACATTCGTGTATTCTGTCGAGTGAGGCCTTTACTACCTGATGAAAGTTGTAGCACAGAAGGAAAGATTTTCAGCTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGGCCAAAAACATTCTTTTACATTTGATAAAGTCTTTACACCAGAGGCATTACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTCGATGGTTACAAGGTTTGCATCTTTGCCTATGGTCAAACAGGGTCAGGAAAAACCTATACAATGATGGGAAGGCCGGGACATCCAGAGGAAAAGGGCTTGATACCACGTTCATTAGAACAAATATTTCAAGCAAAGCAGTCTCAGCAACCTCAGGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACTATTCGTGATCTGATATCTACAACAACACGCGTGGAAAATGGTACTCCTGGGAAACAATATACAATCAAACATGATGCAAATGGAAATACACAAGTTTCTGATCTCACAGTAGTGGATGTTAATAGTGCTAAAGAGGTTGCTTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTTTGAATCTCATTGATCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGATCAACTGGGGACCGATTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCATTGAGTGATGTTATATTCGCCTTAGCCAAGAAGGAGGATCACCCTTGTCTAGGTGGAGACTCCAAGACACTGATGTTTGTGAACATATCACCTGATCCTTCTTCAGTTGGTGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTAGGCGTCAAACCAATGGACGTTCCATAGAGTCTCGCTTGAGCTATTTCTGA 2316 0.4059 MVTKIQNRPPFLLTSTPPPLSKSFEGDVLLLDKNKEQRVGAETMVGTPINGRTRQAFTVVNGGGHDLSPSSAPPSNAGSDYGVIEFTREDVEALLNEKAKRKDRFNYKVCIRWLQDLEMYYSLEHEKLKNSLELSQQKSIEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEETERSAAVETLVKEREARLDIERSHSTLSEDLGRAQREMQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKATVVESITMLRGQLTISVSSQEEAIKQKDVLSTEVSSLRGELQQVRDERDRQLSQVQTLSSELEKFKESTKHSSTELDSLTLKANDLEEKCSLKDTQLKALEEKLATAEKKLQVSDISVYETRTEYEGQQKLVNELQRRLEDAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMETSGRAIDLAQNGQKHSFTFDKVFTPEALQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLISTTTRVENGTPGKQYTIKHDANGNTQVSDLTVVDVNSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1031 771 Coils Coil 241 268 - -
Aed5g1031 771 Coils Coil 150 177 - -
Aed5g1031 771 Coils Coil 84 104 - -
Aed5g1031 771 SUPERFAMILY Tropomyosin 285 414 - -
Aed5g1031 771 ProSiteProfiles Kinesin motor domain profile. 429 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 PRINTS Kinesin heavy chain signature 505 526 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 SMART kinesin_4 427 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 Pfam Kinesin motor domain 435 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed5g1031 771 ProSitePatterns Kinesin motor domain signature. 663 674 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed5g1031 771 PANTHER KINESIN-LIKE PROTEIN 44 770 - -
Aed5g1031 771 Coils Coil 388 415 - -
Aed5g1031 771 Coils Coil 290 324 - -
Aed5g1031 771 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 770 - -
Aed5g1031 771 Coils Coil 346 380 - -
Aed5g1031 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 748 IPR027417 -
Aed5g1031 771 Coils Coil 199 233 - -
Aed5g1031 771 CDD KISc_C_terminal 427 752 - -
Aed5g1031 771 Gene3D Kinesin motor domain 374 752 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1031 Aed-Chr5 8133820 8140224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1031 106 764 Calmodulin-binding Proteins AT5G65930 29.646 2.09e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1031 K10405 - gmx:100784221 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1031 5 8133820 8140224 Aed5g1031 5 8133820 8140224 ECH
Aed1g0710 1 8268171 8274441 Aed5g1031 5 8133820 8140224 PCT