Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0989 ATGGATGTGCTTCAGATAAGTTATGATGGGCTACAAGAATTGGAAAAGCAAATATTTTTAAATATTGCTTGTTTCTTCAGCGGGTACGAGGAGTTATATGTGAAGAAAGTTCTAGATTGCTGTGGATTTCATGCTGAAATTGGAATAAGAGTCCTCCTTGATAAATCACTCATAGACAATTCACATGGAGACATTCAAATGCATGGTTTGTTGAAAGTTTTGGGCAGAAAAATTGTTAAAGGCAATTCACCAAGAGAGCCAGAAAAGTGGAGCAGGGTTTGGCTCTATAAGGATTTCTACAATATGTCAAAGGCAACGGAAACGGCAATCAATGAAGCCATTGTTTTAGACATATCCAGAGAGAGGGAAAAACTGATGGTTGATGCTGAAGCGTTGTCCAAAATGAGTAACCTTAGATTGCTTATATTTCATGATGTGAAGTTTATGGGAAGCCTTAATTGCCTCTCCAATAAACTACAATTTCTTCAGTGGTATAACTATCCTTTCTCATATTTACCTTCAAGTTTTCAGCCGAACAAACTGGTTGAATTGATCTTGCAACGAAGCAACATCAAAAAACTCTGGAAAGACATAAAGGTGGGCCAAGAAACAACTACCCCTATTGGTTGGATTGATATTGTTGTTCCTGGAAATCAAATACCAAGGTGGTTCAGCAATCAAAATGTTGGAACTTCAATAAGCCTAGACCCATCTCCCATTATGCTTGACATTAATAACTGGATTGGCATTGCTTGCAGCGTGGTATTTGTGGCAGCTGGTGATCCAACTAGTTTGGATGATCATGCTTTGAATTCCTCTATATGCATTGATTTTGAGATGAAATCTTATTCATCCCGGGCTTCTTCCCCGCTGTATATGCCAATACTTCTTGATAGGGATCATGTAACCCTCGAATCGCATCACATGTGGCTACTCTATTTGACTAGGGCAGAATTTATTTCTTATTTTAAAATAGAAACAATGATTGATCTTAATGGCATCAAAATGCTAATCATGGTTGATCGCTCCAAAGGTTTGCACTTGGAGGTGTGCAGTTGTGGATATCAATGGGTATTTAAGGACAATCTGCAAAACCTAAACCCAACAATAATGCGTAGAGGACACAACAACAACAACAACAGTCCAGTTGATGATGATGATTTTTGTTCAAATGAAATGAGTGATCTTGATTCAATGGAATTCGCACCCCTCGTTTATGACCCTCTTGGTTTGCATTTGGAGGTGAAAAATTGTGGGTATCGTTGGATATTTGGGGAGGATATTCAACAATTCAAATCAAACATGATGTGCAGTGGAAATTCTTCATCTCGGAAGCGGAAGCGTTTAACAAGCGATTAA 1359 0.3834 MDVLQISYDGLQELEKQIFLNIACFFSGYEELYVKKVLDCCGFHAEIGIRVLLDKSLIDNSHGDIQMHGLLKVLGRKIVKGNSPREPEKWSRVWLYKDFYNMSKATETAINEAIVLDISREREKLMVDAEALSKMSNLRLLIFHDVKFMGSLNCLSNKLQFLQWYNYPFSYLPSSFQPNKLVELILQRSNIKKLWKDIKVGQETTTPIGWIDIVVPGNQIPRWFSNQNVGTSISLDPSPIMLDINNWIGIACSVVFVAAGDPTSLDDHALNSSICIDFEMKSYSSRASSPLYMPILLDRDHVTLESHHMWLLYLTRAEFISYFKIETMIDLNGIKMLIMVDRSKGLHLEVCSCGYQWVFKDNLQNLNPTIMRRGHNNNNNSPVDDDDFCSNEMSDLDSMEFAPLVYDPLGLHLEVKNCGYRWIFGEDIQQFKSNMMCSGNSSSRKRKRLTSD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0989 452 Pfam C-JID domain 215 363 IPR045344 -
Aed5g0989 452 Gene3D Ribonuclease Inhibitor 92 208 IPR032675 -
Aed5g0989 452 SUPERFAMILY L domain-like 127 196 - -
Aed5g0989 452 Pfam Leucine Rich Repeat 180 199 IPR011713 -
Aed5g0989 452 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 211 323 - -
Aed5g0989 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 211 323 IPR044974 GO:0006952
Aed5g0989 452 SUPERFAMILY "Winged helix" DNA-binding domain 2 101 IPR036390 -
Aed5g0989 452 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 195 - -
Aed5g0989 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 195 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0989 Aed-Chr5 7785733 7796330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0989 2 85 WRKY Transcription Factor Family AT5G45050 34.884 2.75e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0989 - - gmx:100820213 342.043