Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0979 ATGAACAAAAGGGGTGGGAGAGGAGAGTTTTTGGCCTTTACCTGCATGATGTTAGAGGATTTGATCAACACCTCTGGTAACAGGGGAATCATCACTTTTGGGGATGGAGGTGCTTATGAGAAAGTGAAAAACAACATGAATTTCAGTTCATTTTTTGATGGGCACTTGGTGCATTACCAATCCTTGTTAGAAGCAATTGAGTCACACTTCCCAACCCGTTTCTCAGAAGCAAGAATTGCCATGGAGCAATTGTTTTTGCAACCTTGCATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGTGGTGGCTGCCATCTTGAGGCAGAGATTATTAGCTTAGAGGGTTGCCAATTGAGCAAAAATATTTTAATGGAAATCAGAGAAGTGTTGAGAGGAAGTGCAGGTTCATATCAGGCCAGGATTGAAGGACAAAATGAGAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTCTTGAAATTTTCAACTTGGAAAAACTAA 510 0.4039 MNKRGGRGEFLAFTCMMLEDLINTSGNRGIITFGDGGAYEKVKNNMNFSSFFDGHLVHYQSLLEAIESHFPTRFSEARIAMEQLFLQPCISSLDWLQTWEEMKSGGCHLEAEIISLEGCQLSKNILMEIREVLRGSAGSYQARIEGQNENELVLEYKGTQLLKFSTWKN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0979 169 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 168 - -
Aed5g0979 169 Pfam GRAS domain family 42 168 IPR005202 -
Aed5g0979 169 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 168 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0979 Aed-Chr5 7593963 7594821 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g0979 GRAS 1.1e-06 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0979 - - gmx:100792407 276.944