Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0973 ATGATGTCCAGGTCGTATACGAATCTTTTAGATTTGGCCTCCGGGAATTTCCCAGCAATGGGGAGGGAGACCAGGGAGCGGAGGCGGCTGCCAAGGGTTATGAGTGTCCCAGGATTTGTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAATCCGTCGACTGTTACTACGGATAGAATGATCATTGTGGCTAACCAGCTACCATTGAAGGCAAAGCGGAAAGAGGACAACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCGTTGCTTTTACAACTTAAGGATGGGCTCCCAGATGACATGGAGGTTCTTTATGTTGGTTCGTTACGTGTTGACATCGATCCAGCGGAACAGGATGACGTATCACAGTATTTATTGGATAAATTCAAATGTGTGCCGACTTTTCTACCCGCTGACGTTTTGGCTAAATTTTATGATGGCTTCTGTAAACGACAGTTGTGGCCACTTTTTCATTACATGTTACCATTTTCAACAGATAAAAGCCACCGATTTGATCGCTCTTTGTGGGAAGCTTATGTGCTGGCAAACAAGCTATTTTTTCAGAAGGTAGTTGAAATAATAAACCCAGAAGATGATTACATTTGGATTCATGATTATCATTTAATGGTGCTGCCAACTTTTATTAGAAGGCGTTTTAACAGGGTTAAGATGGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACTCTTCCAGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATTATTGGATTCCATACCTTTGACTATGCTCGTCATTTCCTGTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGAGTCAGTTATGAGAATGGCAGATGAGGAATGCAAGGTAAGGGAGCTCAAACTGCAATTTGAAGGAAAAACCATCTTGCTTGGTATTGACGATATGGACATTTTTAAAGGCATAAATTTAAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCTAGAGGTAATGGGATACATCTGGAGGAGATACACACTGAAATACAGGAAAGCTGCAACAGGATCAACAGAGTATATGGGAGACCTGAGGCAATGAATGAGGCCATCTCAATGAGTGATGGAGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACTCATGATGTAGCTTACTGGGCACGTAGTTTCTTGCAAGACATGGAGCGGGCTTGCACAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAAGCAAGGAGTTTGACCAGGGTCCATTTGGTGGGGAGATCAATGTGACCTTAAATTGTGGTGTAGCGGATGACAACGATAGGAAGAAAAGAGTGAAAGCTCTTGCTTGGCACCAACAGCAACCTTTCCAAAAGCTTATACTTATTGATAGGATATGGTAA 1716 0.4272 MMSRSYTNLLDLASGNFPAMGRETRERRRLPRVMSVPGFVTEVDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRSLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEECKVRELKLQFEGKTILLGIDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGNGIHLEEIHTEIQESCNRINRVYGRPEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWARSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEFDQGPFGGEINVTLNCGVADDNDRKKRVKALAWHQQQPFQKLILIDRIW 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0973 571 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 411 522 IPR001830 GO:0003824|GO:0005992
Aed5g0973 571 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 410 IPR001830 GO:0003824|GO:0005992
Aed5g0973 571 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 411 522 - -
Aed5g0973 571 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 410 - -
Aed5g0973 571 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 456 - -
Aed5g0973 571 Pfam Glycosyltransferase family 20 411 452 IPR001830 GO:0003824|GO:0005992
Aed5g0973 571 Pfam Glycosyltransferase family 20 63 410 IPR001830 GO:0003824|GO:0005992
Aed5g0973 571 Gene3D Glycogen Phosphorylase B; 56 316 - -
Aed5g0973 571 CDD GT20_TPS 63 452 IPR001830 GO:0003824|GO:0005992
Aed5g0973 571 Gene3D Glycogen Phosphorylase B; 317 410 - -
Aed5g0973 571 Gene3D Glycogen Phosphorylase B; 411 437 - -
Aed5g0973 571 Gene3D Glycogen Phosphorylase B; 438 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0973 Aed-Chr5 7547947 7552188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0973 402 522 Trehalose Biosynthesis Gene Families AT1G06410 76.423 2.99e-56 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0973 K16055 - gmx:100800847 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0973 5 7547947 7552188 Aed5g0973 5 7547947 7552188 ECH