Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0971 ATGGCCTCCTTGCCCTCGGGGCACCACCACCACCTCCACCAACCACCGGCGACTACGCAGCCGTCTCAACCACCGCAGTCTCAGCCGCAGCCCGAAGTGCCTCGCCGGAGTTCCGATATGGAGACCGATAAGGATATGTCAGCTACTGTCATTGAGGGGAATGATGCCGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCGTTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAGACTGGAGAGGCAGTGGCTATTAAAAAGGTCTTGCAAGACAGGCGGTACAAAAATCGTGAATTGCAGTTAATGCGCTTAATGGATCACCCAAATGTAGTTTCCCTGCAGCACTGTTTCTTCTCCACAACAAGCAGAGATGAACTTTTTCTAAACTTGGTGATGGAATATGTCCCTGATTCAATGTACGGAGTTATAAAGCACTACAGTACTATGCACCAGAGAATGCCTCTCATCTATGTGAAACTGTATACATATCAAATCTTTAGGGGATTAGCATATATCCATTCCGCACTGGATGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTATGTGATTTTGGGAGTGCCAAAGTTCTGGTCAAGGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACATCTTCTATTGATATCTGGTCAGCTGGCTGTGTTCTTGCTGAGCTTCTTCTAGGACAGCCATTATTTCCTGGAGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAGGAAATCCGTTGCATGAACCCAAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTACGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGCGAGCCAAATGCCCGTCTACCAAATGGTCGTCCACTGCCCCCACTTTTCAACTTTAATCATGAGTTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATCCCAGAGCATATTAAGAGGCAGATTGGTCTCAGCTTCCCTCATTCTGCCGGTACATAG 1248 0.4615 MASLPSGHHHHLHQPPATTQPSQPPQSQPQPEVPRRSSDMETDKDMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLQHCFFSTTSRDELFLNLVMEYVPDSMYGVIKHYSTMHQRMPLIYVKLYTYQIFRGLAYIHSALDVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFNHELAGASPELINRLIPEHIKRQIGLSFPHSAGT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0971 415 MobiDBLite consensus disorder prediction 1 42 - -
Aed5g0971 415 PANTHER OS02G0236200 PROTEIN 37 408 - -
Aed5g0971 415 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
Aed5g0971 415 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 408 - -
Aed5g0971 415 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Aed5g0971 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Aed5g0971 415 SMART serkin_6 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0971 415 ProSiteProfiles Protein kinase domain profile. 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0971 415 SUPERFAMILY Protein kinase-like (PK-like) 78 385 IPR011009 -
Aed5g0971 415 Pfam Protein kinase domain 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0971 415 Gene3D Transferase(Phosphotransferase) domain 1 159 402 - -
Aed5g0971 415 CDD STKc_GSK3 74 362 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0971 Aed-Chr5 7526971 7531941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0971 14 397 MAP Kinase Gene Family AT2G43790 32.367 4.86e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aed5g0971 Pkinase 7.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0971 K14502 - gmx:100810924 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0971 5 7526971 7531941 Aed5g0971 5 7526971 7531941 ECH
Aed1g0744 1 8482729 8487858 Aed5g0971 5 7526971 7531941 PCT