Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0957 ATGCCGTCATCGAGGGTGCCGTCGTCAAGGGTGAAGTGCAACTGGGTTCGTGGAAAATCTCTTGGCAGTGGCAGCTGTGGCTCGGTCAACATAGTCATACCAAAAAACACTTCCACATATATTCCACCACCCACCGCGGTCAAATCCTCCATTGTCAATAAGTCGTATACGCTTGTGATGGAGGAGTACGTGCTTCACTTTCTCGGACCGTCCCCTTACATCATCAAATGTTATGGGCACGAACTCACTGTTGAAAACGGGAAATCATTATACAATATTTTCCTCGAATATGCCGACGGTGGTTCCCTCTACGATCACATCATCAATCGTGGCGGAGGGGGGCTTCCGGAGGCTTGCGTACGACAATACACCAGGGCCATTGCAGAGGGTCTGAGACACATTCATTCCAAAGGCTTCGTCCACTGCGATGTGAAGCCTGAAAACATTCTCCTTTTCAACCACGGCGCCATTAAGATTGCAGATTTTGGGCTGGCAAAGATAAAAGGAGAGATTAACACCGAGTATCGTCGCAGAGGGACACCCATGTACATGTCTCCGGAATCGGTGAATCGGAATGAGTATGAGTGGCCTGTAGATATATGGGCTCTCGGTTGCACTGTGGTAGAAATGATATCAGGAGCAAACGTCTGGGATGTGGGTGACGGGGAGATTAAGACGTGGACACCGTTGCTGAATCGGATAGGGAAGGGAAAAGAAATGCCTAACATTCCAAAAAGAGTTATCAATAGAAGGAAAAGATTTTCTGGATAA 771 0.4799 MPSSRVPSSRVKCNWVRGKSLGSGSCGSVNIVIPKNTSTYIPPPTAVKSSIVNKSYTLVMEEYVLHFLGPSPYIIKCYGHELTVENGKSLYNIFLEYADGGSLYDHIINRGGGGLPEACVRQYTRAIAEGLRHIHSKGFVHCDVKPENILLFNHGAIKIADFGLAKIKGEINTEYRRRGTPMYMSPESVNRNEYEWPVDIWALGCTVVEMISGANVWDVGDGEIKTWTPLLNRIGKGKEMPNIPKRVINRRKRFSG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0957 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aed5g0957 256 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 254 - -
Aed5g0957 256 Gene3D Transferase(Phosphotransferase) domain 1 103 253 - -
Aed5g0957 256 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 14 254 - -
Aed5g0957 256 SMART serkin_6 15 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0957 256 Gene3D Phosphorylase Kinase; domain 1 9 102 - -
Aed5g0957 256 SUPERFAMILY Protein kinase-like (PK-like) 12 240 IPR011009 -
Aed5g0957 256 Pfam Protein kinase domain 17 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0957 256 ProSiteProfiles Protein kinase domain profile. 15 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0957 Aed-Chr5 7432188 7432958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0957 15 254 MAP Kinase Kinase Kinase AT3G50310 48.163 3.31e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed5g0957 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0957 - - gmx:100816949 315.079