Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0945 ATGGAAGAGATGCGAGAAGATGCAGGACCATCAGAGCGAAGGCCATCCAACATGTCATGGTGGCCTTCAGATTTTGTTGAAAATTTCGAATCTGTTTCTTTGAGCTCTCAAGATGAGACCTTAAATAATAAAGAATCACCTAGACATTCTGACCAGGATGTTATGTCACCTCAGAAGGCGTCACAAATTCTGTGGCGCACTGGAATGCTTTCAGAACCAATACCCAATGGTTTTTATTCAGTCATTCCAGAGAAAAGACTCAGGAAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCAAGCTTTGGGTGGAGAGGGTTTTAAGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAGGTTATCTATGCTGAAGCAACTAAATGTGGCATTAGTTAGAGGATTGAATTCAAATACACCTGCGATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAGAGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAGGAATCCTCCCATATGTTTGAGAATCGTGGTATTCAGATGCTGGGGCAAATAAGACATGGTTCATGCCGTCCACGAGCTATCTTATTTAAAGTCTTAGCAGATACTGTAGGTCTTGAAAGTAAGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCTTACAAGCATATGTCAGTGATAGTTGTGTTAAATTCTGTGGAATTGCTAGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGCTCAACCAAGTCAATTCTTATGACACATATTTCTGCAGCAGGAGAGAGTGATTCCGCAGAAAATGATTCATGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTGTTGAAAAGGAGGATAACCTCCAATTCCATAGAAGATTTGAGGTGTCTTCAAATGTATCAGGTCTTCCCCTGCGAAATATGATGTTACGATCAAGTACCAGTCTGGACAGGAATTTGAGTTTTTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCAGAAAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGAGCTCATGGACTGTCCAAGCTTAGTGGTGACAGGACTGCTTTTAGAGATTTTGCTGATGACCACTCTACACTAAGATCTAGCTGTAAGTCAGATGGTGCTTCCTCATCAGAAGCTCGTAGGATACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGAGCAATGAATGAAACACTAAAGCAAAATCGTCTTCTGAGAGAGCAAGGGGCTGATAGTTCATTGTCCCATTCTCCAATTGATAGAACCAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGATGGTCACCATACGAGGTCCCCCTTATATTCGCTACACCGTGACCCTGTGACGTCTCAAAAAGCATTGTCGTTACCTTCTTCTCCGCATGATTATAGTGGACAAGCTACTGAGAGAAGCGGGGCGTCCTCAGAATATACATTGAATGATCTGGAGTCTACTTGGAACAAAGTCCTTGAATCGCCAATGTTCAGTAATAGACCTCTGCTACCATATGAAGAATGGAATATCGATTTCACAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGAACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATTTCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCCTGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTCATATGAGCGGTCAGAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGGGACATATGCCGATCCAAACACACGGATAAACACTTGTTTCTGGTTATGCATAACTTTCAGAACCTTTCTCTTCATCAAACACTTAGTGTGGTTTATTCCGTTGCTAATGAGGGTTCACGATTGGATATTCCTGAAGGCCCACTTGGAAGGCTGATTTCAGAGTGTTGGGCGGAACCACATGAACGCCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA 2211 0.4238 MEEMREDAGPSERRPSNMSWWPSDFVENFESVSLSSQDETLNNKESPRHSDQDVMSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLRKLFDSIPTLDELQALGGEGFKADVIVVDAEKDRRLSMLKQLNVALVRGLNSNTPAMIKKIAGLVSDFYKRPNVESPAKAALEESSHMFENRGIQMLGQIRHGSCRPRAILFKVLADTVGLESKLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEDNLQFHRRFEVSSNVSGLPLRNMMLRSSTSLDRNLSFSHSEPNIATAFGRRSQKKVIAEQRTASSSPEHPSLRAHGLSKLSGDRTAFRDFADDHSTLRSSCKSDGASSSEARRIPEIGDDIARAVRAMNETLKQNRLLREQGADSSLSHSPIDRTSSADLQKNVSNFHLDGHHTRSPLYSLHRDPVTSQKALSLPSSPHDYSGQATERSGASSEYTLNDLESTWNKVLESPMFSNRPLLPYEEWNIDFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHMSGQKKKLSWRRRLKMLRDICRSKHTDKHLFLVMHNFQNLSLHQTLSVVYSVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0945 736 SUPERFAMILY Protein kinase-like (PK-like) 525 660 IPR011009 -
Aed5g0945 736 MobiDBLite consensus disorder prediction 359 378 - -
Aed5g0945 736 MobiDBLite consensus disorder prediction 487 512 - -
Aed5g0945 736 Gene3D Phosphorylase Kinase; domain 1 544 629 - -
Aed5g0945 736 Pfam Protein tyrosine and serine/threonine kinase 552 660 IPR001245 GO:0004672|GO:0006468
Aed5g0945 736 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 683 734 - -
Aed5g0945 736 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 660 - -
Aed5g0945 736 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g0945 736 MobiDBLite consensus disorder prediction 395 414 - -
Aed5g0945 736 Coils Coil 421 441 - -
Aed5g0945 736 ProSitePatterns Protein kinases ATP-binding region signature. 557 578 IPR017441 GO:0005524
Aed5g0945 736 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 683 734 - -
Aed5g0945 736 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 660 - -
Aed5g0945 736 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Aed5g0945 736 ProSiteProfiles Protein kinase domain profile. 551 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0945 736 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0945 Aed-Chr5 7343907 7357363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0945 686 735 MAP Kinase Kinase Kinase AT3G58640 70.000 4.20e-18 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Aed5g0945 EDR1 1.9e-54 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0945 - - gmx:100807193 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0752 1 8533224 8549799 Aed5g0945 5 7343907 7357363 PCT