Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0940 ATGCGTCCACCGCGGAAGAGGGTAGATTTCACGCGTGGCGACAAGGTGGAGGTGTGCAGCAAAGAGGCCGGCTTCGTCGGATCCTACTACCAGGCCACCGTCGTGTCGCGCCTCGACAACGGCCTCTACGTCGTCCGCTACGACACGCTTCTCGAGGACGACGAGTCGCAGCCGCTCACGGAGACGCTGTTCCCGAAGGAGCTCCGTCCGACGCCGCCGCGCGTCGCGAGGAAGGAATTCTCGCTGTACGAGTGCGTGGACGCCTTCGACAACGACGGCTGGTGGCTCGGCCAGATCACCGGAAAGAGAGACGACGACGGCCATTACTATGTCTACTTCGCGTCCACCAACGAGGAGATCGCGTATCGCGCTTCCGCGATTAGGGTTCACCACGACTGGAACCATGGGGATTGGCTTCTGCCTTCTTCTTCTTCTTCGTCCACCAATTGA 450 0.6111 MRPPRKRVDFTRGDKVEVCSKEAGFVGSYYQATVVSRLDNGLYVVRYDTLLEDDESQPLTETLFPKELRPTPPRVARKEFSLYECVDAFDNDGWWLGQITGKRDDDGHYYVYFASTNEEIAYRASAIRVHHDWNHGDWLLPSSSSSSTN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0940 149 Pfam Agenet domain 13 73 IPR008395 -
Aed5g0940 149 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Aed5g0940 149 SMART agenet_At_2 78 135 IPR014002 -
Aed5g0940 149 SMART agenet_At_2 8 76 IPR014002 -
Aed5g0940 149 Gene3D - 1 80 - -
Aed5g0940 149 PANTHER - 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0940 Aed-Chr5 7276580 7277029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0940 20 140 PHD Transcription Factor Family AT5G58610 30.201 1.92e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0940 - - gmx:121175082 246.128