Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0935 ATGAGTCCCATTAAGGAAGAGCAAGAACCAAACCAAATAGCTGGCCACAAAGAACTCGGTCACAAAAGCCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGACACCAGTGTGTACCCGAGAGAGCATGAGAGCTTGAAGGAGCTACGAGAGTTGACGGAAAAACACCCTTGGAACCTGATGGCTACACCACCTGACAAAGGACAACTTCTAGGCATGTTACTTAAGCTTATAAACGCCAAGAACACCATGGAAATAGGCGTCTTCACTGGTTACTCCTTGCTTTCCACTGCCCTCGCCCTCCCTTCTGACGGAAAGATCTTAGCGATGGATGTTAATCGGGAATATTATGAACTGGGATTGCCTGCCGGTGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACCAACTCATCAAAGACGAAAAGAATAAGGGAACGTTCGATTTCATCTATGTGGATGCTGATAAGGACAACTACTTGAACTACCACAATAGAGTGATTGAGCTTGTCAAGGTTGGTGGATTGATCGGCTACGATAACACCCTTTGGAATGGTTCCGTGGCAGCCCCACCCGATGCGCCTCTCATGGATTATGTCCAGTATTATCGAGATTTCGTCATGGACCTCAACAAAGCTCTTGCACTTGATTCAAGGGTCGATATTTGCCAGATTCCTGTTGGTGATGGGATTACCTTGTGCCGTCGCATCATCTGA 735 0.468 MSPIKEEQEPNQIAGHKELGHKSLLQSDALYQYILDTSVYPREHESLKELRELTEKHPWNLMATPPDKGQLLGMLLKLINAKNTMEIGVFTGYSLLSTALALPSDGKILAMDVNREYYELGLPAGVAHKIDFREGPALPLLDQLIKDEKNKGTFDFIYVDADKDNYLNYHNRVIELVKVGGLIGYDNTLWNGSVAAPPDAPLMDYVQYYRDFVMDLNKALALDSRVDICQIPVGDGITLCRRII 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0935 244 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 243 IPR002935 GO:0008171
Aed5g0935 244 Pfam O-methyltransferase 36 243 IPR002935 GO:0008171
Aed5g0935 244 PANTHER O-METHYLTRANSFERASE-RELATED 2 244 - -
Aed5g0935 244 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 244 - -
Aed5g0935 244 CDD AdoMet_MTases 89 183 - -
Aed5g0935 244 Gene3D Vaccinia Virus protein VP39 12 244 IPR029063 -
Aed5g0935 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 242 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0935 Aed-Chr5 7230074 7231149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0935 6 243 Monolignol Biosynthesis Gene Families AT4G34050 75.207 4.14e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0935 K00588 - gmx:100799303 466.848