Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0934 ATGGGTTTTCGTTTAGCTGGTATCAGAAAGGCATTATTTGCAGCAGATCAAACATCTTCAAAAGCAGTAGATGCACCAAAGGGCCATCTTGCAGTCTATGTTGGAGAGAAGATGAAGTGGTTTGTTATCCCAGTATCATACTTGAACCAACCTTCATTCCAGAACTTGTTGAAACAAGTTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACGTATAACTTGTTGCTTGAATTGA 273 0.4103 MGFRLAGIRKALFAADQTSSKAVDAPKGHLAVYVGEKMKWFVIPVSYLNQPSFQNLLKQVEEEFGYDHPMGGLTIPCSEDVFQRITCCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0934 90 Pfam Auxin responsive protein 17 89 IPR003676 GO:0009733
Aed5g0934 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Aed5g0934 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0934 Aed-Chr5 7192146 7192418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0934 17 89 Calmodulin-binding Proteins AT5G20810 46.575 3.16e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0934 K14488 - gmx:100820621 159.073