Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0921 ATGAGGAGCAGTGTGGGAGATATTGTTCAAGTTGAAGGAGGACACATTGTAAGGTCCACAGGTAGGAAGGATCGGCACAGCAAGGTGTACACTTCGAAAGGGCCGCGCGATCGCCGCGTTAGACTCTCGGCACACACTGCCATTGAGTTCTATGATGTTCAAGACAGGCTTGGCTATGACAGACCAAGCAAGGCTGTGGATTGGCTCATCAAGAAGGCTAAGCTTTCCATTGACAAGCTTGCTCAGCTTCCTCCTTGGCATCCACCTATTTACGAGGAAGAGCAGAATAATGTTGCTGCAGGATCAAGTGGAAACATAGCCATTCCACAACAACAACAACAGCAGCAGCAGCAGCAACAGCAACAGCAACAAGAATCAGAGACTAGTGGCTACAACTTTCAGCTCCAAAGTCAATTGGGGGCATTCATTTCAACTCATGTTGACACTGACCCTATCAATTTTCAAACCAACAACTCCTCAGAAGAACTTGGCCTATCCCTCCATTGCTTCCAAGACCACCCTGGCCTCATTCATTGGCAATCACAACCAAATCAAACACCCCCTCCTTCAAATGAACACCACCAAGTTCAAACCCTTTTTGCTGGCTCAACCACCCCACTTGGGCTTGAGAACCATTATCAAAGAGCTGTTACAGCTTGGAACAATGAAGCAGCAGCAACCACCACAACAGATCATGTGAACAGGTTGGGGTTCATACTCAACTCACAGCCATTTATAGGCCAAGGTTCTCCTTCAGCTTATGCTCAAAATGAGGGGACCCTTCAGTCCAGTCTCTCATTTCCAATGACTTTCTCTGATCTTCACAGGCCCCAGCTAGTAATGAACCAACCTTCCATCTTTGGCAGCAGGTTTGTGTCTGATGGATTAGGTGGGTTCTGCAATATTCCAGATAGAATTCAAGGTGTGGAAGAGAACCATGGAGATGATGCTTCCAATAGGCCATCTTCTTCTCCTAGTTCTATCCACTGA 990 0.4707 MRSSVGDIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKLSIDKLAQLPPWHPPIYEEEQNNVAAGSSGNIAIPQQQQQQQQQQQQQQQESETSGYNFQLQSQLGAFISTHVDTDPINFQTNNSSEELGLSLHCFQDHPGLIHWQSQPNQTPPPSNEHHQVQTLFAGSTTPLGLENHYQRAVTAWNNEAAATTTTDHVNRLGFILNSQPFIGQGSPSAYAQNEGTLQSSLSFPMTFSDLHRPQLVMNQPSIFGSRFVSDGLGGFCNIPDRIQGVEENHGDDASNRPSSSPSSIH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0921 329 MobiDBLite consensus disorder prediction 108 130 - -
Aed5g0921 329 Pfam TCP family transcription factor 21 127 IPR017887 -
Aed5g0921 329 MobiDBLite consensus disorder prediction 304 329 - -
Aed5g0921 329 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Aed5g0921 329 PANTHER TRANSCRIPTION FACTOR TCP4 3 326 - -
Aed5g0921 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 326 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0921 Aed-Chr5 7015195 7016184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0921 5 88 TCP Transcription Factor Family AT3G15030 85.714 1.37e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed5g0921 TCP 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0921 - - vun:114168475 451.44