Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g0920 | ATGGATTCCTTGAACGATGATCACGACCATGAGGAACCACTTGTTCGATACCACAACGAGGTGAACAGAACAATATTGTATGTCTCCATGGTTTCCTTCATGACGGTCTTGTTCCTCGTATTCGCCCTCTACCTCTACGCCAGATGCGTCCTCCGGGGCCGCACCCGCCACCGCGCCGCCATTCGCCGCCTCACCATCGCTGCGCTTCATGTTTCCGACCTCGACGCCACCACACACCGCCACGCCGAGCCACCCAACACGGGCCTTGAACCCGCCATCATCGCATCGCTGCCAACCTTCAACGTCAAGGCGAAGGCAAAGGATGGCAGCGGCGGCAGTGATGGCGGTGACACCATCTCTGCAGTGGAGTGTGCGGTGTGCTTGAGTTCTCTGGATAGTGGAGAAAAGGCCAAGTTGCTTCCCAACTGCAATCACTTTTTTCACGTGGACTGCATTGACACGTGGCTGGGTTCTCACTCTACGTGTCCTCTCTGTCGAGCCGGGGTTAAGCCTCGGCTTGCACCACAGGATCGCGAGGGTCCTATGAGTCTTTCTCTTAATGGTGCATCTGCACTACTCAATGCAAGTATAGAGAATAGTTGCAAAGACAACAACAAAGACAACGGTGAGTCATCGAAAATTAATGATTCTAATTCTAGTTCACGGTTTAGAAGGATTCTCACTAGGGAAAGATCTTCAAGAAGAATCCAACCCTCTGGCCATGATGATGAGGATGGTGGTGTTGATCAAGATTTGGAGAGACAATGA | 768 | 0.5208 | MDSLNDDHDHEEPLVRYHNEVNRTILYVSMVSFMTVLFLVFALYLYARCVLRGRTRHRAAIRRLTIAALHVSDLDATTHRHAEPPNTGLEPAIIASLPTFNVKAKAKDGSGGSDGGDTISAVECAVCLSSLDSGEKAKLLPNCNHFFHVDCIDTWLGSHSTCPLCRAGVKPRLAPQDREGPMSLSLNGASALLNASIENSCKDNNKDNGESSKINDSNSSSRFRRILTRERSSRRIQPSGHDDEDGGVDQDLERQ | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g0920 | 255 | MobiDBLite | consensus disorder prediction | 200 | 255 | - | - | |
Aed5g0920 | 255 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 172 | IPR013083 | - | |
Aed5g0920 | 255 | PANTHER | RING FINGER DOMAIN-CONTAINING | 6 | 255 | - | - | |
Aed5g0920 | 255 | MobiDBLite | consensus disorder prediction | 223 | 255 | - | - | |
Aed5g0920 | 255 | SMART | ring_2 | 124 | 165 | IPR001841 | - | |
Aed5g0920 | 255 | Pfam | Ring finger domain | 123 | 166 | IPR001841 | - | |
Aed5g0920 | 255 | CDD | RING-H2_PA-TM-RING | 123 | 166 | - | - | |
Aed5g0920 | 255 | PANTHER | RING-H2 FINGER PROTEIN ATL40-LIKE | 6 | 255 | - | - | |
Aed5g0920 | 255 | SUPERFAMILY | RING/U-box | 123 | 173 | - | - | |
Aed5g0920 | 255 | ProSiteProfiles | Zinc finger RING-type profile. | 124 | 166 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g0920 | Aed-Chr5 | 7010173 | 7010940 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g0920 | 4 | 255 | C3H Transcription Factor Family | AT2G42360 | 41.085 | 2.20e-49 | 160 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g0920 | K19038 | - | gmx:100811308 | 342.043 |