Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0917 ATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCAGACTTCTCTTCTCCTCACCAAAAGATGATGCCTCCCGACCTCAAACCCATGATGTCAAGCCAGAACCCTTCATGGGTGGACGAGTTTCTCGAGTTCTCCGCGGCGAGGCGCGGGGCCCACCGCCGGACGGTGAGCGACTCCACAACGTTCATGGATGCGCCCTTGGTGCACCACCATTGCAAAGGTAATAGTGTTGGTGGTGGTGACAGTGACAACGAGTTCGAGAGGTTCAACGATGAACAATTCATGTCAATGTTTAGTGATGAGGCTTCAAGAAACAACAACAATGAGGATAACAATAATAATAATACTACCATGATGGCACTCACGTTGTCCTCCTCCAACCCTTCTACACCGTCCGATCACAACAGCATCAATGATGAGAAGAAAATTATGAACAAGGAAAAGGAGGAGGATGAGGAAGAGAAGAAGCAAGTGAAGAATGAGTCAGATGAGGATGAAGAAAGCCAATGCAAACAAGAAATCACACAACTTCCCAACAACGATGATGATAGTAATAACAACAATAGTAATGCAAATGCAACACCTAGTTCCAATGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATTTTGGCAAATAGACAATCGGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAGCGAAGTGTGACTTCATTACAGGCCGAAGTTTCAGTATTGTCTCCACGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTGAATGTTGATAACAGTGCTTTGAAGCAAAGAATCGCCGCAATGGCACAAGACAAGATTTTCAAAGATGCGCATCAAGAAGCACTGAAGAGGGAGATAGAGAGATTGAGGCAAGTGTATCACCAACAAAACATAACGAAGATGGACAATAATAATAATAATGCTGCAGGGTCACCACCACCATCTCAATCACCAAAACCATTATGTGAAACTCTCACTGAAAAGGAACAGCTTATCAATGTTTGA 1032 0.439 MAQLPPKIPNMTPNWPDFSSPHQKMMPPDLKPMMSSQNPSWVDEFLEFSAARRGAHRRTVSDSTTFMDAPLVHHHCKGNSVGGGDSDNEFERFNDEQFMSMFSDEASRNNNNEDNNNNNTTMMALTLSSSNPSTPSDHNSINDEKKIMNKEKEEDEEEKKQVKNESDEDEESQCKQEITQLPNNDDDSNNNNSNANATPSSNEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAAMAQDKIFKDAHQEALKREIERLRQVYHQQNITKMDNNNNNAAGSPPPSQSPKPLCETLTEKEQLINV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0917 343 MobiDBLite consensus disorder prediction 176 204 - -
Aed5g0917 343 PANTHER BASIC LEUCINE ZIPPER 34 1 340 - -
Aed5g0917 343 MobiDBLite consensus disorder prediction 1 25 - -
Aed5g0917 343 SMART brlzneu 205 269 IPR004827 GO:0003700|GO:0006355
Aed5g0917 343 MobiDBLite consensus disorder prediction 106 138 - -
Aed5g0917 343 MobiDBLite consensus disorder prediction 309 330 - -
Aed5g0917 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 259 IPR004827 GO:0003700|GO:0006355
Aed5g0917 343 Pfam bZIP transcription factor 209 252 IPR004827 GO:0003700|GO:0006355
Aed5g0917 343 CDD bZIP_plant_RF2 210 260 IPR044759 GO:0003700|GO:0006355
Aed5g0917 343 MobiDBLite consensus disorder prediction 106 210 - -
Aed5g0917 343 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 340 - -
Aed5g0917 343 Coils Coil 138 172 - -
Aed5g0917 343 MobiDBLite consensus disorder prediction 139 175 - -
Aed5g0917 343 Gene3D - 208 281 - -
Aed5g0917 343 SUPERFAMILY Leucine zipper domain 209 263 IPR046347 GO:0003700|GO:0006355
Aed5g0917 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Aed5g0917 343 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0917 Aed-Chr5 6995080 6998981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0917 1 286 bZIP Transcription Factor Family AT3G58120 54.902 2.09e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed5g0917 bZIP_1 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0917 - - gmx:778128 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0917 5 6995080 6998981 Aed5g0917 5 6995080 6998981 ECH