Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0914 ATGCAAAGAAACAACAGTGGAATGCATCCAGCATGTGCAGCATGTAAGCATCAAAGGAAGAAATGCAGTGAAAGTTGTGTATTGGAACCCTACTTTCCATCAAACAGAAGCCGTGAGTTCCATGCAGTGCACAAGGTTTTTGGTGTTAGCAACATAACAAAGTTGGTGAAGAATGCAAAAGAGGAAGATAGAAGAAGAGTTGTGGACTCACTGATATGGGAAGCATGTTGTAGGCAAAGGGACCCTATACAAGGTCCTTATGGAGAGTACACTAAAGTTTACAATGAGTATCAGAAAGTGTTTGATGAACTCAAGAGATTCAAAAGCCAAAACCAGCTTTTCCAATTCCCTAATTCTCTAGGGTTGAAGTCTGTGCAAGATTTGATTGCTTGCAATGTTGGAACAAAAGGGGAACACAAAGTGGAAGTTGTTGATAATACATTGGATTATCTTCACGGGAAAAATAATATTAATGGTGTTTTTGATTCTGATATTTATAATACTTATTGTTCGAATTATTTGCAAGAGTTTCAGAATATGAGGTCAGAAGTTGTCATGCCGTTTCAGCAACACTCTCAACCATACTATATTACAGGTAACAATGTTTGA 609 0.376 MQRNNSGMHPACAACKHQRKKCSESCVLEPYFPSNRSREFHAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIQGPYGEYTKVYNEYQKVFDELKRFKSQNQLFQFPNSLGLKSVQDLIACNVGTKGEHKVEVVDNTLDYLHGKNNINGVFDSDIYNTYCSNYLQEFQNMRSEVVMPFQQHSQPYYITGNNV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0914 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 3 182 - -
Aed5g0914 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 182 - -
Aed5g0914 202 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Aed5g0914 202 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0914 Aed-Chr5 6984168 6984776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0914 9 109 AS2 family AT1G06280 55.446 3.04e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed5g0914 LOB 1.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0914 5 6984168 6984776 Aed5g0914 5 6984168 6984776 ECH