Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0911 ATGGTGGGTCCCATTCTCCGTTCTCTCTGGTCCTCCACCAGAAAATCTTTCTCCTCTTCTTTCTCTCCTCCTCTATCCCACTCGCGCTTCTTCACACGCGCCTTCGCCGCCGCTCCCGCCTCCGCCGCCACCGCAGCCGAAACAACCGCCTCCTCTCTCGACCCCAGCCGCCTCCGCAACGTGGCCGTGATTGCCCATGTCGATCACGGCAAGACCACCCTCATGGACCGCCTCCTCCGCCAGTGCGGCGCTGACATCCCCCACGAGCGCGCCATGGACTCCATCTCGCTTGAGCGCGAGCGCGGCATCACCATCGCCTCCAAGGTCCACGCCCTAATTTCAATCATTCTATCGAATCGGATCTTCGTTACGTCTGTTTCGTGGAAGGAGAATGAGCTGAACATGGTTGATACTCCCGGACACGCTGATTTTGGCGGCGAGGTTGAGCTTGTTGTTGGGATGGTTGAGGGAGCGATTTTGGTTGTTGATGCTGGTGAAGGCCCGCTTGCACAAACAAAATTTGTTCTTGCAAAGGCCTTAAAGTACGGGTTGCGGCCTATTCTTCTTTTAAACAAAGTAGACCGACCTGCAGTTACTGAGGAGATATGTAATGAAGTTGAGAGCCTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAGCAACTAGATTTTCCTGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCTTCCACCACGTATACCAAGGATCCTCCTGCTGAGGCCAAAAATATGTCACAGTTGCTTGATGCTGTTGTGAGACATGTTCCACCACCAAATGCAAGCATCGATGCACCTTTCCAAATGCTGGTTTCAATGATGGAACGAGATTTCTATCTTGGGCGAATTTTGACTGGACGCATATACGCTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGAAATAAAGATTCTGGTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAAGAAGGGTACGAACATGGTTGTAACTGATTGTGCTGGGGCTGGTGATATAATATCAGTTGCTGGCCTGTCAAGTCCAGCAATAGGCCATACAGTGGCAACTGTTGAGATTATGTCTGCTTTGCCCACTGTTGAATTGGACCCTCCAACAATTTCCATGACTTTTGGGGTAAATGACTCCCCATTGGCTGGTCGTGATGGCACTCATTTGACTGGGGGGAGAATTGGTGACCGACTGATGTCTGAAGCTGAAACCAACCTTGCCATTAATGTGCTTCCAGGCTTATCAGAATCATTCGAAGTTCAGGGAAGAGGAGAGCTACAGCTGGGCATTTTAATTGAGAATATGAGACGCGAAGGATTTGAGTTATCTGTCTCTCCACCTAAAGTAATGTATAAAACTGAAAATGGTCAGAAGCTGGAGCCTGTAGAAGAAGTTACAATCGAGATAAATGATGAGCACGTTGGCTTGGTAATGGAGGCCTTGTCTCATAGACGAGCAGAGGTTACGGACATGGGTCCTGTCTCAGGAACAGTTGGTCGAACTAGATTGTGTTTGACTTGTCCATCAAGGGGCCTGGTTGGGTATAGGAGTGTGTTCAGCAGTGACACACGTGGAACTGGATTTATGCATCGCGCTTTCCATGCATATGAAAAATTTCGAGGCACTCTTGGCAATGTCAGGAAAGGAGTACTGGTCTCAATGGGTTTTGGTACAATCACAGCTCATGCATTGATGAGCTTAGAAGCTCGAGGGACTCTTTTTGTATCTCCTGGAATGGAGACATATGATGGAATGATTATTGGAGAAAATTCACGGGATTCAGATCTTGATGTCAATCCTGTGAGGAGTAAAGAACTTACAAATGTCCGTGCTGCTTGCAAAGATGAGAATGTGAAGCTGACTCCCCCTCGCCTTATGACACTTGAAGAAGCTATAGGGTATGTAGCTTCGGATGAGCTTATTGAGGTTACACCAAAATCCATCCGTTTGAGGAAGAAATACCTTGATGTTAACAAGCGTAAATCCATGAGTAGAAGGCCAAAGGAATGA 2043 0.4802 MVGPILRSLWSSTRKSFSSSFSPPLSHSRFFTRAFAAAPASAATAAETTASSLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVHALISIILSNRIFVTSVSWKENELNMVDTPGHADFGGEVELVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPAVTEEICNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTYTKDPPAEAKNMSQLLDAVVRHVPPPNASIDAPFQMLVSMMERDFYLGRILTGRIYAGVVRVGDRVHGLRNKDSGAEKIEDGKVVKLMKKKGTNMVVTDCAGAGDIISVAGLSSPAIGHTVATVEIMSALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMSEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPVEEVTIEINDEHVGLVMEALSHRRAEVTDMGPVSGTVGRTRLCLTCPSRGLVGYRSVFSSDTRGTGFMHRAFHAYEKFRGTLGNVRKGVLVSMGFGTITAHALMSLEARGTLFVSPGMETYDGMIIGENSRDSDLDVNPVRSKELTNVRAACKDENVKLTPPRLMTLEEAIGYVASDELIEVTPKSIRLRKKYLDVNKRKSMSRRPKE 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0911 680 CDD BipA_III 379 456 - -
Aed5g0911 680 Pfam Elongation factor G C-terminus 469 553 IPR000640 -
Aed5g0911 680 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 679 - -
Aed5g0911 680 Gene3D - 462 556 - -
Aed5g0911 680 Pfam Elongation factor Tu domain 2 289 362 IPR004161 GO:0005525
Aed5g0911 680 CDD BipA_TypA_C 471 551 IPR035651 -
Aed5g0911 680 Gene3D bipa protein 557 672 IPR042116 -
Aed5g0911 680 Gene3D - 56 268 IPR027417 -
Aed5g0911 680 Pfam Elongation factor Tu GTP binding domain 57 265 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 PANTHER ELONGATION FACTOR FAMILY PROTEIN 4 679 - -
Aed5g0911 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 277 IPR027417 -
Aed5g0911 680 TIGRFAM small_GTP: small GTP-binding protein domain 59 203 IPR005225 GO:0005525
Aed5g0911 680 SUPERFAMILY EF-G C-terminal domain-like 377 460 IPR035647 -
Aed5g0911 680 CDD BipA_TypA_II 275 372 - -
Aed5g0911 680 SUPERFAMILY Translation proteins 217 372 IPR009000 -
Aed5g0911 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 56 268 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 Gene3D Elongation Factor G (Translational Gtpase), domain 3 380 664 - -
Aed5g0911 680 SUPERFAMILY EF-G C-terminal domain-like 471 587 IPR035647 -
Aed5g0911 680 Gene3D Translation factors 270 373 - -
Aed5g0911 680 PRINTS GTP-binding elongation factor signature 100 108 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 PRINTS GTP-binding elongation factor signature 150 161 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 PRINTS GTP-binding elongation factor signature 186 195 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 PRINTS GTP-binding elongation factor signature 134 144 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 PRINTS GTP-binding elongation factor signature 60 73 IPR000795 GO:0003924|GO:0005525
Aed5g0911 680 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 58 672 IPR006298 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0911 Aed-Chr5 6925845 6933857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0911 57 195 Eukaryotic Initiation Factors Gene Family AT3G22980 38.621 2.46e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0911 K06207 - gmx:100782425 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0911 5 6925845 6933857 Aed5g0911 5 6925845 6933857 ECH