Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0903 ATGGATTTTGATAATGAAGACCATTATGCCAAACTACTTCGAGCTCAAACCCACATATTTCATCATACATTCGGTTTCATAAACTCTATGTCTCTTAAATGTGCAATTGATTTGTGCATACCCGATATCATACATAACTACGGCAAACCCATGCCACTCTCACAACTCATTGCTTCACTTCAAATTCACCCTTCCAAGACTTGTTTCCTTCCCCGTTTGATGCAAATTTTGACTCATTCCGGTTTCTTCAATCAACACAATGTTGTTAAAGAAAATGAGCATGAAGTGAGTTATGTGCTAACCGATGCTTCTAGATTACTCCTTAAGGACCACCCTTTTAGTATGATTTCTATACCACAAGTCATACTTGATCCAATTTTGGTGAATCCATGGTTTCAATTCTCTAATTGGTTCACAAATGAAGACCCTACACCGTTTCACACGCAACATGGGATGTCATTTTGGGATTATGCTAGCACTGAGCCCAAACTCAATCACCTTTTTAATGATGCCATGACTAATGACTCTCGATTGGTGTCAAGTGTGGTGATTGAGAAGTGCAAGGGAGTGTTTGATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGAACTGGGGCTATGGCTAAGGCTATTGCCAAGTCATTTCCTCAATTGAAGTGCATTGTGTTTGATCTTCCACATGTTGTTCATGGTTTGCATGGAATGGAGAACATAACATATGTTGAAGGGGACATGTTTGAAGCAATTCCTTCTTCTGATTCCATTATGTTGAAGAAATGTAAGGAGGCAATCACAAACAAAGACAAAGGAAAAGTGATTATCATAGACGTGGTGATAGAAAATAAGGAGAAGGCACACAATGAATTAGATCAAACGAAACTCTTCTATGACATAGAGATGATGGTGTTAGTAACCGGAAAAGAGAGAAATGAGAAAGATTGGGCTAAGTTGTTTTTCTCTGCAGGTTTCAATAACTACAAGATAACTCCAGTTCCAGGTTTCAAGTCTCTCATCGAGGTATATCCATAG 1029 0.3897 MDFDNEDHYAKLLRAQTHIFHHTFGFINSMSLKCAIDLCIPDIIHNYGKPMPLSQLIASLQIHPSKTCFLPRLMQILTHSGFFNQHNVVKENEHEVSYVLTDASRLLLKDHPFSMISIPQVILDPILVNPWFQFSNWFTNEDPTPFHTQHGMSFWDYASTEPKLNHLFNDAMTNDSRLVSSVVIEKCKGVFDGLESLVDVGGGTGAMAKAIAKSFPQLKCIVFDLPHVVHGLHGMENITYVEGDMFEAIPSSDSIMLKKCKEAITNKDKGKVIIIDVVIENKEKAHNELDQTKLFYDIEMMVLVTGKERNEKDWAKLFFSAGFNNYKITPVPGFKSLIEVYP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0903 342 PANTHER O-METHYLTRANSFERASE 5 342 IPR016461 GO:0008168
Aed5g0903 342 PIRSF O-mtase 2 342 IPR016461 GO:0008168
Aed5g0903 342 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 342 IPR016461 GO:0008168
Aed5g0903 342 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Aed5g0903 342 Gene3D - 3 107 IPR036388 -
Aed5g0903 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 341 IPR029063 -
Aed5g0903 342 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Aed5g0903 342 PANTHER ORCINOL O-METHYLTRANSFERASE 5 342 - -
Aed5g0903 342 Pfam O-methyltransferase domain 131 324 IPR001077 GO:0008171
Aed5g0903 342 Gene3D Vaccinia Virus protein VP39 108 342 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0903 Aed-Chr5 6872808 6874517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0903 30 328 Monolignol Biosynthesis Gene Families AT5G54160 31.269 2.15e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0903 - K16040 gmx:100793263 589.341