Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0902 ATGGAGTATTTCGATAACGAAGACCGTTCTTCCAAACTACTTCAAGCTCAAACCCACATACTCAATCTAAGTTTCAGTTTCATCAAATCTATGTCCCTTAAATGTGCAATTGATTTGTGCATACCCGATGTGCTTCATTCCCCGCTTGATGCAAATTTTGACTCATTCAGTCAGCACAATGTTGTTATAGAAAATGAACATGAAGTGAGTTATGTGTTAACTGATGCATCTACACTACTCCTTAATGATCATCCATTGTGTATGACCTCTTTGATGCGATTCAATTTCGATCCAATTATCATTAATCCATTCCATCAATTCTCAACTTGGTTCAAAAATGAAGACCCTACACTATTTCAAACACAACATGGGATGACATTTTGGGATTTTGTTAGGCATGAGCCCAAATTCAATCACATTTTCAATGATGCCATGGCTAGTGACTCTCGATTGGTTTCCAATGTGGTGATTGAGAAGTGCAAGGGAGGATTAGAGTCATTGGTTGATGTCGGAGGAGGAACAGGAACTATGGCTAAGGCTATAGCCAACTCATTTCCACAAATGAAGTGCATTGTGTTTGATCTCCCACATGTTGTTCATGACTTACATGGAACAAAGAACATAGCATATGTTGGTGGGGACATGTTTGAAGCAATTCCTTCTGCTGATTCCATTATGTTGAAGTGGATATTACATGACTGGAAGGATGAGGAATGCTCAAAAATACTAAAGAAATGTAAAGAGGCAATAGCAGGCAAAGACAAAGGGAAGGTGCTAATCATAGACGTGGTGATAGGGAATGAGAAGGGTGATAATGAATTAGATGAGACGAAGCTCTTCTATGATATTGAGATGATGGCATTACTTGCTGCAAAAGAAAGAAATGAGAAAGATTGGGCTAAACTGTTTTTCTCTGCGGGTTTCATTGAACTTTATCCATGA 942 0.3854 MEYFDNEDRSSKLLQAQTHILNLSFSFIKSMSLKCAIDLCIPDVLHSPLDANFDSFSQHNVVIENEHEVSYVLTDASTLLLNDHPLCMTSLMRFNFDPIIINPFHQFSTWFKNEDPTLFQTQHGMTFWDFVRHEPKFNHIFNDAMASDSRLVSNVVIEKCKGGLESLVDVGGGTGTMAKAIANSFPQMKCIVFDLPHVVHDLHGTKNIAYVGGDMFEAIPSADSIMLKWILHDWKDEECSKILKKCKEAIAGKDKGKVLIIDVVIGNEKGDNELDETKLFYDIEMMALLAAKERNEKDWAKLFFSAGFIELYP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0902 313 PIRSF O-mtase 2 62 IPR016461 GO:0008168
Aed5g0902 313 PIRSF O-mtase 53 312 IPR016461 GO:0008168
Aed5g0902 313 SUPERFAMILY "Winged helix" DNA-binding domain 10 85 IPR036390 -
Aed5g0902 313 Gene3D Vaccinia Virus protein VP39 82 313 IPR029063 -
Aed5g0902 313 Pfam O-methyltransferase domain 105 308 IPR001077 GO:0008171
Aed5g0902 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 309 IPR029063 -
Aed5g0902 313 Gene3D - 3 52 IPR036388 -
Aed5g0902 313 PANTHER ORCINOL O-METHYLTRANSFERASE 7 47 - -
Aed5g0902 313 PANTHER O-METHYLTRANSFERASE 56 309 IPR016461 GO:0008168
Aed5g0902 313 PANTHER O-METHYLTRANSFERASE 7 47 IPR016461 GO:0008168
Aed5g0902 313 PANTHER ORCINOL O-METHYLTRANSFERASE 56 309 - -
Aed5g0902 313 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 313 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0902 Aed-Chr5 6868525 6870071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0902 79 308 Monolignol Biosynthesis Gene Families AT5G54160 35.565 1.47e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0902 - K16040 gmx:100793263 443.736