Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0901 ATGGAATCACACAGTGAAGAGAATGTTACAAAATTGCTTCAAGCTCAAACCCACGTTTGGAATCACATTTTCAAATTCATAAACTCTTTGTCCCTTAAATGTGCCATTGAATTAAGCATACCAGATATCATACGCAAGTATGGCCAACCCATGCCACTCTCAAAACTCATTGCTTCACTACCAATCCAACCAACCAAGACTTGCTTCATCTACCGCTTGATGCGAATTTTGACTCATTCTGGTTTCTTCTTTGAGGATAATGAGCAAGAAGAAATGAGCTATGTGCTAACTGATGCATCTAAACTACTTCTTAAGGACCATCACTCGAGTATGACATCCTTGTTACAAGTCATAGTTGATCCAATTTATATTAATCCATGGTATCAATTCACTACTTGGTTAACAAATGAAGACCCTACACCATTTCACACACAAAATGGGATGCCATTTTGGGAATTTGCTGGGTGTGACCCTAAATTCAATCACCTTTTCAATGATGCCATGGCTAGTGACACTCAATGGGTTTCTAGTGTGGTGATTGAAAAGTGCAAGGAGATGTTTAACAGGTCAGAGTCATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGCTAAGGCTATTGCCAAGTCATTCCCACAACTAAAGTGTATTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAACTGAGAACATAAAATATGTTGGAGGAGACATGTTTCAAGAAGCAATTCCTTCCGCTGATTCCATTATGTTAAAGTGGGTGCTACATAATTGGAATGACGAGGAAAGTGTGAAAATACTGAATAAATGCAAGGAGGCTAGAAGTAGCGACGAGGGAAGGGTTATTATCATAGACTTGGTGATGAAGAATGAGAAGGAAGACGATAAATTAATTGAGACGCAGATGTTCTTTGATATGCAGATGATGGTTGCTCAATGGAAAAGAAAGAAACGAGAAAGAATGGGCCAAGCTGTTTCTCTCTGCTGGTTTCAGTGA 1005 0.397 MESHSEENVTKLLQAQTHVWNHIFKFINSLSLKCAIELSIPDIIRKYGQPMPLSKLIASLPIQPTKTCFIYRLMRILTHSGFFFEDNEQEEMSYVLTDASKLLLKDHHSSMTSLLQVIVDPIYINPWYQFTTWLTNEDPTPFHTQNGMPFWEFAGCDPKFNHLFNDAMASDTQWVSSVVIEKCKEMFNRSESLVDVGGGTGTMAKAIAKSFPQLKCIVFDLPHVVAGLQGTENIKYVGGDMFQEAIPSADSIMLKWVLHNWNDEESVKILNKCKEARSSDEGRVIIIDLVMKNEKEDDKLIETQMFFDMQMMVAQWKRKKRERMGQAVSLCWFQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0901 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 334 IPR016461 GO:0008168
Aed5g0901 334 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Aed5g0901 334 Gene3D - 1 103 IPR036388 -
Aed5g0901 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 314 IPR029063 -
Aed5g0901 334 Gene3D Vaccinia Virus protein VP39 104 328 IPR029063 -
Aed5g0901 334 PANTHER ORCINOL O-METHYLTRANSFERASE 7 322 - -
Aed5g0901 334 PIRSF O-mtase 1 328 IPR016461 GO:0008168
Aed5g0901 334 PANTHER O-METHYLTRANSFERASE 7 322 IPR016461 GO:0008168
Aed5g0901 334 Pfam O-methyltransferase domain 127 320 IPR001077 GO:0008171
Aed5g0901 334 CDD AdoMet_MTases 193 290 - -
Aed5g0901 334 SUPERFAMILY "Winged helix" DNA-binding domain 11 107 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0901 Aed-Chr5 6861706 6862818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0901 30 321 Monolignol Biosynthesis Gene Families AT5G54160 33.000 4.16e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0901 - - gmx:100793263 468.003