Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0900 ATGGAACATGAGCAAAGTGAAGATCGTGTCTCCAAACTACTTGGAGCTCAAACCCATGTTTGGAACCACATTTTCAGCTTCATAAACTCCATGTCCCTAAAGTGTGCAATTGAGTTAAACATACCCGACATCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCACCACTTCACTATCAATCCACCCTTCCAAAGCCAACAACATATACCGTTTGATGAGAATTTTGACCCATTCAGGCTTCTTCTCTCAACACAAGGTCAACGACAATAACCTAGAAATCGGTTACACGTTGACCGATGCATCCACTCTACTACTCAAGGACAACCCTTTAAGCATGGCACCTTTCTTGCATGCCATGCTTGATCCAATTTTGACACAGCCATGGCTAAAATTGCCAACATGGTTCCGAAACGACGATCCATCGCCATTTCAAACGGCTCATGGGGTGAAAATTTGGGACTATGCTGACCGTGAGCCGAAGCTTAATGAACTTTTTAATGATGCTATGGCGAGTGACACTCAATTGGTTGCTAATGTGGTTGTTGAGAGGTGCAAGGGTGTGTTCAAGGGATTGGAGTCACTTGTTGATGTTGGAGGTGGCACTGGTACCATGGCTAAGGCAATTGCCGACACATTCCCACAGCTTGAGTGCACTGTGTTTGATCTTCCACATGTTGTTGCCACTTTACAAGGAAGTAACAACTTGAAATATGTTGGTGGGGACATGTTTGAGTCAATTCCGATTGCAGATGCAGCTCTCTTGAAGTGGATATTGCATGACTGGAATGATGAGCAGTGTGTGAAGATACTGGAGAAATGCAAGGAGACAATAAAGAGCAAGGTGATTGTGATAGACATGGTGGTGGAGAATGAAAATAGAGATCATGAAGCAATTGAAACACAACTCTTCATTGACATGGTTGTGATGGTGTTGTATCCGGGAAAAGAGAGAACTGAGAAAGAATGGGCTAAGCTGATTTTCACTGCTGGATTCAGTGACTACAAGATAACTCCGGTGTTGGGTTTAAGGTCTCTCATTGAGATTTACCCATAA 1062 0.436 MEHEQSEDRVSKLLGAQTHVWNHIFSFINSMSLKCAIELNIPDIIHNHGQPMPLSKLTTSLSIHPSKANNIYRLMRILTHSGFFSQHKVNDNNLEIGYTLTDASTLLLKDNPLSMAPFLHAMLDPILTQPWLKLPTWFRNDDPSPFQTAHGVKIWDYADREPKLNELFNDAMASDTQLVANVVVERCKGVFKGLESLVDVGGGTGTMAKAIADTFPQLECTVFDLPHVVATLQGSNNLKYVGGDMFESIPIADAALLKWILHDWNDEQCVKILEKCKETIKSKVIVIDMVVENENRDHEAIETQLFIDMVVMVLYPGKERTEKEWAKLIFTAGFSDYKITPVLGLRSLIEIYP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0900 353 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aed5g0900 353 PANTHER O-METHYLTRANSFERASE 10 353 IPR016461 GO:0008168
Aed5g0900 353 Pfam O-methyltransferase domain 131 335 IPR001077 GO:0008171
Aed5g0900 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 353 IPR016461 GO:0008168
Aed5g0900 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 351 IPR029063 -
Aed5g0900 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Aed5g0900 353 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Aed5g0900 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Aed5g0900 353 Gene3D - 2 107 IPR036388 -
Aed5g0900 353 PANTHER O-METHYLTRANSFERASE 10 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0900 Aed-Chr5 6855923 6857738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0900 31 339 Monolignol Biosynthesis Gene Families AT5G54160 33.544 6.34e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0900 - K16040 gmx:100794122 648.662