Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0892 ATGTTGGTGTTTGTTTTGCTGTTCCTCTGCTTTCTCTCTCCTCTTCCCAACTCTCTCTCTCTAACCCAAGATGGTCTCTTTCTCCTCGAAGCAAGACGTGAACTTTCCGACCCGGAGAACGCCCTCTCCTCCTGGAACCCCGCCGACGCCACCCCATGCCAGTGGCGCGGTGTCACGTGCGACCCCCTCACCTCCGCCGTCACCGCCGTGAGCCTCATTAACTTCTCCCTCTCCGGCCCCTTCCCCGCCGTCCTCTGCCGCGTCGCCTCATTAACCTCCCTCAACCTCACCTTAAACTTCTTCAACGCCACCCTCGCCGCCGTCGCGGAATGCCGTAGCCTCGTAATCCTCGACATCTCCGAAAACTGCCTCGTGGGCCCCATCCCGGACTCTCTCGCCGGAATCGCCACGCTCCAGCACCTGGACCTCTCCGGGAACAACCTCTCCGGCGACATTCCGGCGAGCCTCGCCGCACTCCCCCACTTAAAAACTCTCAACCTCGTCAACAACCTCCTCACCGGAACAATTCCATCCTCACTCGGTAACCTCACTTCGCTTAAACACCTCAAACTCGCTTACAACCTTCTTTTCTCGCCGAGTCGGATACCGAGTCAACTCGGTAACCTCAGGAACCTCGAATCGCTCTTTCTCGCTCGCTGCAACCTCGTGGGCCCCATCCCTGACGCGCTCAGTAGGCTCTCTCAGTTAACGAGCTTAGATTTATCGCAGAACAGAATCACCGGTCGCATTCCACAGTGGCTCACGCGCTTCAAGCGCGTGGTACAGATTGAACTCTACAAAAACAAACTCTCCGGGGAGTTACCCAAGGGAATGTCCAACATGACGAGTCTGAGATTGTTCGACGCGTCCGCGAACGAGTTGACTGGGACGATTCCCGCCGAGTTATGCGAGTTGCCACTAGCGTCGCTGAATTTATACGATAACAAGCTCGAAGGGATTTTGCCGCCGGTTATTGCGCGTTCTCCGAACCTCTACGAACTCAAAGTTTTCAGTAACAGACTCGTTGGAACCTTGCCGAGTGATTTGGGTAGTAACTCGCCGTTGAACCACATGGATGTTTCGTTTAACCGGTTTTCCGGCGAGATTCCGGCGAACATATGCCGGCAGGGGGAGTTTGAGGAGCTTATCATGATGTACAATTATTTCTCCGGTGAAATTCCGGCGAGCCTTGGGAACTGCAAGAGTTTAAGGAGGGTTCGGTTAAAGAACAATAACCTCTCTGGAAGTGTTCCTGATATGATGTGGGGTTTGCCCAATTTGCATTTGCTTGAGCTTTTGGAAAATTCTCTTTCTGGGCACATTTCTAAGGCGATTTCTGGCGCTCACAGTATGACAAATTTGTTGCTTTCTAATAATATGTTTTCTGGGTCGATTCCTGAGGAAATTGGGTTGTTGGATAATCTCGTGGAGTTTGCTGCGAGTAATAACACTCTCTCGGGTCCGGTTCCGGTGAGTGTAGTGAAGTTGAGTCAATTGGTTAATGTTGATCTTAGTTATAATCAACTTTCTGGAGAGCTTAATTTTGGTGGAATTGGTGAACTGAGTAAAGTCGCTGACCTCAATTTGTCACATAATTGCTTTGATGGAAGTGTTCCAAGTGAATTAGAAAACTTGCCTCTGCTTGATTATCTCGATCTTTCTTGGAACAAATTTTCTGGTCAGATTCCAAAGCAGTTGCAGAATTTGAAGCTTACTGGGCTGAATTTGTCTTACAATCAACTTTCTGGGGATATTCCTCCTCTTTACGCCAATAACAAGTATAAGATGAGTTTTATAGGGAATCCTGGCCTCTGTGGGAATCTCTTTGGGCTTTGTGATTGTTCTGGTAAGAGTAGGAATCGGAGGTTTATGTGGATTTTGTGGTCCATTTTTGCTCTTGCTGGAGTTGTGTTCATTGTTGGGGTGGCATGGTTTTTTTTTAAGCTCAGGAAGGTGAAGAAATTGAAGAAGGGTTTAAGCGTTTCGCGGTGGAAGTCGTTTCACAAGCTGGGGTTCAGTGAGTTTGAGATAGCTAAGTTGCTGAGTGATGACAATGTGATAGGAAGTGGAGCCTCTGGGAAAGTGTACAAGGTGGTGCTCAGCAATGGTGAAGTGGTGGCAGTGAAGAGATTGTGTGGAGCAACTATGAACGTGGATGGAGGAATTGTTGGTGCTAGGAAAGACCAATTTGATGCTGAAGTTGAGACCTTGGGGAAGATCAGGCACAGGAACATTGTGAGGTTGTGGTGTTGTTGCAACAGTGGGGATCAAAGGCTTCTGGAAGAAATCAGCAAGGTATTGAGCGTGGGGCTTCATTGTACCACCTCTCTCCCAATGACTCGCCCCACAATGAGAAATGTGGTTAAAATGCTTCAAGAGGTAACAACAGTTCCCAAATGTAGAAGTGTAAACGATGGAAATGTCCCATGTAGCCATGAAGGTTCGGCTCATAGGATCAATGAAGTGTAG 2469 0.4897 MLVFVLLFLCFLSPLPNSLSLTQDGLFLLEARRELSDPENALSSWNPADATPCQWRGVTCDPLTSAVTAVSLINFSLSGPFPAVLCRVASLTSLNLTLNFFNATLAAVAECRSLVILDISENCLVGPIPDSLAGIATLQHLDLSGNNLSGDIPASLAALPHLKTLNLVNNLLTGTIPSSLGNLTSLKHLKLAYNLLFSPSRIPSQLGNLRNLESLFLARCNLVGPIPDALSRLSQLTSLDLSQNRITGRIPQWLTRFKRVVQIELYKNKLSGELPKGMSNMTSLRLFDASANELTGTIPAELCELPLASLNLYDNKLEGILPPVIARSPNLYELKVFSNRLVGTLPSDLGSNSPLNHMDVSFNRFSGEIPANICRQGEFEELIMMYNYFSGEIPASLGNCKSLRRVRLKNNNLSGSVPDMMWGLPNLHLLELLENSLSGHISKAISGAHSMTNLLLSNNMFSGSIPEEIGLLDNLVEFAASNNTLSGPVPVSVVKLSQLVNVDLSYNQLSGELNFGGIGELSKVADLNLSHNCFDGSVPSELENLPLLDYLDLSWNKFSGQIPKQLQNLKLTGLNLSYNQLSGDIPPLYANNKYKMSFIGNPGLCGNLFGLCDCSGKSRNRRFMWILWSIFALAGVVFIVGVAWFFFKLRKVKKLKKGLSVSRWKSFHKLGFSEFEIAKLLSDDNVIGSGASGKVYKVVLSNGEVVAVKRLCGATMNVDGGIVGARKDQFDAEVETLGKIRHRNIVRLWCCCNSGDQRLLEEISKVLSVGLHCTTSLPMTRPTMRNVVKMLQEVTTVPKCRSVNDGNVPCSHEGSAHRINEV 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0892 822 SUPERFAMILY RNI-like 275 594 - -
Aed5g0892 822 Gene3D Ribonuclease Inhibitor 24 176 IPR032675 -
Aed5g0892 822 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Aed5g0892 822 SUPERFAMILY L domain-like 44 306 - -
Aed5g0892 822 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 1 760 - -
Aed5g0892 822 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 761 815 - -
Aed5g0892 822 Gene3D Ribonuclease Inhibitor 177 273 IPR032675 -
Aed5g0892 822 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 760 - -
Aed5g0892 822 SUPERFAMILY Protein kinase-like (PK-like) 681 757 IPR011009 -
Aed5g0892 822 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515
Aed5g0892 822 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Aed5g0892 822 Gene3D Ribonuclease Inhibitor 278 615 IPR032675 -
Aed5g0892 822 ProSiteProfiles Leucine-rich repeat profile. 570 592 IPR001611 GO:0005515
Aed5g0892 822 ProSiteProfiles Leucine-rich repeat profile. 137 160 IPR001611 GO:0005515
Aed5g0892 822 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 761 815 - -
Aed5g0892 822 SMART LRR_typ_2 545 568 IPR003591 -
Aed5g0892 822 SMART LRR_typ_2 183 209 IPR003591 -
Aed5g0892 822 SMART LRR_typ_2 159 182 IPR003591 -
Aed5g0892 822 SMART LRR_typ_2 281 305 IPR003591 -
Aed5g0892 822 SMART LRR_typ_2 233 257 IPR003591 -
Aed5g0892 822 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Aed5g0892 822 ProSiteProfiles Protein kinase domain profile. 681 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0892 822 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Aed5g0892 822 Pfam Leucine rich repeat 234 294 IPR001611 GO:0005515
Aed5g0892 822 PRINTS Leucine-rich repeat signature 233 246 - -
Aed5g0892 822 PRINTS Leucine-rich repeat signature 138 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0892 Aed-Chr5 6797522 6800701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0892 756 818 Receptor kinase-like Gene Family AT1G28440 44.928 1.27e-08 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed5g0892 LRR_8 2e-06 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0892 - - gmx:100796415 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0892 5 6797522 6800701 Aed5g0892 5 6797522 6800701 ECH