Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0891 ATGTGGTTCTGTCATAGGAGACTGAAGGACCGAAATGCCAAGAAGCTGCAAAATGATTCACTGGTGGGGGAGGGTATTGAGCAAGAAGTGGCAGGGGCTGATCTTAGGCATGAATGTGGTTTGGCTTCTGGGCTGTTTGGTCATCTCGATTCACGGCAAATTGTGCCTCAGCCTGGGATGATGGCCTTTCCCAGGACGGGAGCTGGATTGCCAGCAGTTGAGAGCAGCAGTTACTATGAACCACCTCAGCCCATGGAGATGCTGCGAGCTGTTGCATTTGTGGAAAGACAGTTGGGGGAGCCGATACGAGAAGATGGACCCATCCTGGGGATGGAATTTGATTCTTTGCCGCCAGGTGCATTTGGTGCACCAATAGGGACACTGACAATGGGGCAACACAGGCAATGTGGAAGGCCTTTTGAGGCAAAAATTTATGAACAACTGGACAAGGATGTTTCAAGGACTCTGCATGAATATCAATTTATTCCAGAGAAGCCATCTGTTAGAAATGAGACATATGAGAGAGTTGCCCCCTCTATCCACTATAGTTCTCTTGATGGTGTTCCACATTCTAGGACTTTATTATCTAGTGGACGATCTTTCCTCAATGGGAATGAATCTGCACCTTATGGATACAGAATTCAAGGTCAGATACCTGTTCTAAATCTTTTGTCTCGACAAGGTAGGCAGAATCATGTTTTGCCATCTGCTTCAGGAGAGAATGATGTAACTACTGACATTCATAATGGGGCTCACCCAATAACTCTGATCGAAAGCCCTCTAATGCCATCTGATGGGAGGGTTACCCATGCAGAGGAATTATCAAGGCTTCAAAGGAAGCGAAAGAATGAAGAGGCTAGAATGCAACGAGAACTTGAAGCACAAGAGAAAAAAATTAAAAAGGAGCTTGAAAAACAGGATATTCTAAGGCAAAAGAGAGAAGAACAAATAAAGAAAGAAATGGAGAGATATGAACGTGAAAGGCAGAAGGAAGAGGAAAGGTTATTGCGGGAAAGACTGCGAGAGGAGGAGAGGTACGAAAGAGAACAGAGGCGTGAACAGGAGCGGCAACAGAAGTTTTTACAAAAGGAATCAATCAGAACTGAGAAACTGAGACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCCAATGAGAGAGCTATTGCTCGCAGAATTGCTAAAGAATCGATAGAACTTATTGAAGATGAACGCCTGGAACTCATGGAGTTAGCTGCATCAAAGAAAGCACTTTCTTCAATACTGGCTCTTGACTACGAAACTATTCAAAATCTTGAATTATATGGAGATGGACGGACATCCTTCCCACCCAAGTCTGTACAGTTGAAAAGAATCTTTTCAATTAAACCTTGGTCAGATTCTGATGAGAACGTAGGAAATCTTCTGATGGTTTGGAGGTTCTTGATTACCTTTGCTGATGTTCTTGGAATATGGCCATTTACCTTGGATGAACTTATACAAGCTTTTCATGACCATGACCCAAGGTTGTTAGGTGAGATTCATATTGCACTTCTGAGATCCATTATAAAAGACATTGAAGATGTTGCAAGAACACCCTCTACTGGGTTAGGATGTAACCAACACAGTGTTGCAAACTCTGGTGGGGGACATCCACAGGCCTATCTGTGGGGTTTTGATATAAGAAATTGGCAGCGATATCTAAATCCCTTAACATGGCCAGAGATCTTGCGACAATTTGCTTTGTCAGCTGGATTTGGGCCCAAATTGAAGAAACGGAATATTGAGCAGGGCAATGATGGTAGAGATATAATTTCTAATCTACGCAATGGAGCAGCTGTTGAAAATGCTGTTGCTATTATGCAAGAGAAGGGATTATCTAACCCAAGAAGATCTAGGCATTGTTTGACACCTGGAACCGTTAAATTTGCTGCATTTCACGTTCTTTCTCTTGAAGGAAGCAAAGGCCTTAATATATTGGAAGTTGCAGACAAGATCCAGAAATCTGGACTTCGTGATCTTACAACAAGCAAAACACCAGAGGCTTCTATTTCTGCTGCTTTGTCTAGGGATACAAAACTATTTGAAAGGACAGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAAGACCCAGTTGATTCTGAAGCAATTTATTCTGCTGCCAGGGAAAGAATCAGGATGTTCAAAAGTGGATTTGTGGAGGCAGCAGCAGCTGCTGATAATGGTGAAAGGGATGAAGATTCTGAAAGCGATATGGCAGAAGATCCTGAGATTGATGATTTAGGTACTGAAACAAATACAAAAAAGGAGAGTTCCAATTATGAGGGATTTAATGCAGACTCTGAGATGAAAAATGGAAAGGATAGCATTGAGGTTTTGAAAACTCATGAAACTTGCCATGAGAAAGTGGGTGACGATTTAGTTTCAATTGTTTCTGAAGACTTCAATGAACATAAAGATGTTAGTACCTCTTGTGAAATTGCTGTTTGCAGCAATGATGTAGTTGATCCTAATGTCAAAGGCATAGATGTTGATGAAAGCATTCCAGGTGAATCATGGATACAAGGGCTTATGGAGGGAGAGTACTCCGATCTTAGTGTAGTGGAGCGTCTTCAGGCTCTTGTTGCTTTGATTGGTGTGGCAACTGAAGGAAATTCAATTCATGTTGTACTTGAGGTGGCCATAAAGCAACATATACGTGAACGTCTAGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTTGATAAACGTCGTATCAAAGAGGATTACTTTGTTAAGATGCAGTCTGTCTCTTATTTGGACAAAACGAATGAGCCAGCTGTTGTATTTCCCTCAGCAGAGCATAAACATAACCCAGTGCTTATTGTTGATGACAAAAGTAACAAGGCTTTGCTCACTTCCCATGACCTGCATGAACAGAGCAATGAACTACGGGAAAATCAGAATCATCTTCAGAGTTCTCCATTAGAAGTCAATACACAGATGCAAGATTGTTCTACTGGCCCAGATAATTATTCTTTCCAACAATCAGGATATGTTATTGAAAAATCAAGGTCAAATTTAAAGTCATTCATTGGTCACTTGGCGGAGCAAACTTACATGTATAGGTCATTGCCTCTTGGTTTGGATCGAAGACATAATCGATACTGGCAATTCACCACATCTGCTCAAAATGATCCAGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAGCTGATTGATTCTGAAGTGGGTTTTGATGCTTTATTGGCTTCTTTGGATTTACGTGGGATCAGGGAGTCCCACTTGCATATGATGTTGCAAAGAATTGAGATGTACTTCAAAGAATCTGTTAGAAGGAATGCCCAAAATTTCAACATGAGAATGCAAAATGGAGACACTGTCAAGATACTCAAGACAGAAGCTGTTGAAATGGCTTCAAACCAAGATTGCAGTGCTAATGTTCATGGTTCTTCCTCTGTATGCATTGATAATCTGGATGCATCAGAGACCTCAACATCATTTGTGGTTCAGCTTGGAAGAAATGAAACTGATAACAAAGATGCTTTTATGAGATATTGGGATTTTGAGAAATGGATGCGAAAGGAATGCCTAAATTCCTCTGTATTATGTGCAATGAAGTTTGGGAAGAGGTGCCACCAACTGCAGTCCATATGTGATTTATGCCTTCATGCCTATTTCTCTGGGGGAGCTCCATGCTCTTGCTGCCGTAAAGCCTGCAGTGCTTGTAAGAGCAACCCGAGTTCTTCCGAACATATTGTTCATTCTGAAGGCAAAGTGAAGATTGGCATTGATTGTTTTCATGCTTCATCCTCATTGTCTTTGAGGATTAGATTGCTCAAAATCTTATTGTCAGTTGTTGAGGTAACCCTTCCCCAAGAAGCTCTGCGACCTCTTTGGAGAGACAGCTACAGGAAATCTTGGAGTACAAAGCTGGATGCTTCCTCATCAAGTGAAGACCTTCTTCAGATATTGACTGCATTGGAAGGTGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCGGTGAGCTGTTGGGTTTATTTAGTGCTTCTGGATGTCACACTAATGATTCCATTGATGGTGAAAGGATGCCTGTACTTCCATGGGTTCCATATACATCATCTGCTGTGGCTCTAAGGCTCTTGCAACTTGATACATGCATCTTTTACACCTCACATCAGAAGCTGGAGTCCGAGAAGAATAAGAAAATTGGAATTGTGATTAAGCTTCCATCAAAACATGCTTCTACCAAAAATTCCTACAATGCTGGGGCAATTGAAACTTCACATCAGACTGAACGTCCGGTAGAGAACTGGGTTGATCTTGGTGATGGTCTTACGAGCTGCAGCAGAGGACAAAGGTCCCAACAAGGCCGTGGCTGCTCTCATGGTGGAAGATCATCATCGAAAGGGAGGGTGGTTAGTTCAAGATCTGGCTCTAAAAAGAGAAGCACTACCTCTAAAAGCAGGAAAATGGGAAAATTACTTGGATGGAAAGGAGACCACGCGGACAAGGAGGAAATGTCCGTGGTCGTCGCAGCATTAGAAGCAGGCAGAAATCAGAAGCCAAGGTGGATGTGA 4617 0.4226 MWFCHRRLKDRNAKKLQNDSLVGEGIEQEVAGADLRHECGLASGLFGHLDSRQIVPQPGMMAFPRTGAGLPAVESSSYYEPPQPMEMLRAVAFVERQLGEPIREDGPILGMEFDSLPPGAFGAPIGTLTMGQHRQCGRPFEAKIYEQLDKDVSRTLHEYQFIPEKPSVRNETYERVAPSIHYSSLDGVPHSRTLLSSGRSFLNGNESAPYGYRIQGQIPVLNLLSRQGRQNHVLPSASGENDVTTDIHNGAHPITLIESPLMPSDGRVTHAEELSRLQRKRKNEEARMQRELEAQEKKIKKELEKQDILRQKREEQIKKEMERYERERQKEEERLLRERLREEERYEREQRREQERQQKFLQKESIRTEKLRQKEELRREKEAARIKAANERAIARRIAKESIELIEDERLELMELAASKKALSSILALDYETIQNLELYGDGRTSFPPKSVQLKRIFSIKPWSDSDENVGNLLMVWRFLITFADVLGIWPFTLDELIQAFHDHDPRLLGEIHIALLRSIIKDIEDVARTPSTGLGCNQHSVANSGGGHPQAYLWGFDIRNWQRYLNPLTWPEILRQFALSAGFGPKLKKRNIEQGNDGRDIISNLRNGAAVENAVAIMQEKGLSNPRRSRHCLTPGTVKFAAFHVLSLEGSKGLNILEVADKIQKSGLRDLTTSKTPEASISAALSRDTKLFERTAPSTYCVRPAYRKDPVDSEAIYSAARERIRMFKSGFVEAAAAADNGERDEDSESDMAEDPEIDDLGTETNTKKESSNYEGFNADSEMKNGKDSIEVLKTHETCHEKVGDDLVSIVSEDFNEHKDVSTSCEIAVCSNDVVDPNVKGIDVDESIPGESWIQGLMEGEYSDLSVVERLQALVALIGVATEGNSIHVVLEVAIKQHIRERLEAANALKKQMWAEAQLDKRRIKEDYFVKMQSVSYLDKTNEPAVVFPSAEHKHNPVLIVDDKSNKALLTSHDLHEQSNELRENQNHLQSSPLEVNTQMQDCSTGPDNYSFQQSGYVIEKSRSNLKSFIGHLAEQTYMYRSLPLGLDRRHNRYWQFTTSAQNDPGCGRIFVELHDGCWKLIDSEVGFDALLASLDLRGIRESHLHMMLQRIEMYFKESVRRNAQNFNMRMQNGDTVKILKTEAVEMASNQDCSANVHGSSSVCIDNLDASETSTSFVVQLGRNETDNKDAFMRYWDFEKWMRKECLNSSVLCAMKFGKRCHQLQSICDLCLHAYFSGGAPCSCCRKACSACKSNPSSSEHIVHSEGKVKIGIDCFHASSSLSLRIRLLKILLSVVEVTLPQEALRPLWRDSYRKSWSTKLDASSSSEDLLQILTALEGAIKREYLDSNYETTGELLGLFSASGCHTNDSIDGERMPVLPWVPYTSSAVALRLLQLDTCIFYTSHQKLESEKNKKIGIVIKLPSKHASTKNSYNAGAIETSHQTERPVENWVDLGDGLTSCSRGQRSQQGRGCSHGGRSSSKGRVVSSRSGSKKRSTTSKSRKMGKLLGWKGDHADKEEMSVVVAALEAGRNQKPRWM 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0891 1538 MobiDBLite consensus disorder prediction 744 760 - -
Aed5g0891 1538 MobiDBLite consensus disorder prediction 1460 1494 - -
Aed5g0891 1538 Coils Coil 267 357 - -
Aed5g0891 1538 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1516 - -
Aed5g0891 1538 ProSiteProfiles DDT domain profile. 467 526 IPR018501 -
Aed5g0891 1538 MobiDBLite consensus disorder prediction 738 783 - -
Aed5g0891 1538 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1516 IPR044977 GO:0006357
Aed5g0891 1538 SMART testlast3 467 526 IPR018501 -
Aed5g0891 1538 Pfam DDT domain 468 523 IPR018501 -
Aed5g0891 1538 Coils Coil 363 394 - -
Aed5g0891 1538 ProSiteProfiles HARE-type HTH domain profile. 637 706 IPR007759 GO:0006355
Aed5g0891 1538 MobiDBLite consensus disorder prediction 1459 1515 - -
Aed5g0891 1538 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 850 892 IPR028942 -
Aed5g0891 1538 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1041 1112 IPR028941 -
Aed5g0891 1538 Pfam HB1, ASXL, restriction endonuclease HTH domain 637 704 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0891 Aed-Chr5 6771428 6782537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0891 1 1453 Homeobox Transcription Factor Family AT5G44180 48.802 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aed5g0891 WSD 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0891 - - gmx:100797480 2383.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0891 5 6771428 6782537 Aed5g0891 5 6771428 6782537 ECH