Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0890 ATGGGTGTGGATTACTACAAGGTCTTGCAGGTTGATAGGAGCGCCAGCGACGATGACTTGAAGAAGGCTTATAGGAAACTTGCTATGAAATGGCACCCTGATAAGAACCCCAACAACAAGAAAGAGGCTGAAGCTAAGTTTAAGCAGATTTCTGAAGCGTATGAGGTACTTAGTGATTCTCAGAAGAGAGCAATCTATGATCAGTATGGAGAAGAGGGTCTTAAGGGTCAGGTTCCTCCTCCTAATGCTGGTGGTGGTGGTGGTGCTGGAACTGGAGCTACTTTCTTCTCCACAGGAGATATCCCAGGATCGTATCAGTTCAATCCGAGGAATGCTGACGACATTTTTGCAGAGTTCTTTGGGTTCTCAACCCCATTTGGTGGAATGGGTGGGAGAGGTGGTCCTGGTGGTGGCAGTGGTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCATGAGATCAAGGTTCCCTGGTGGGATGTTTGGTGATGATATGTTTGCATCTTTTGGTGAAGGAGCAGTACATATGAGTCAAGGTGCTCCTAGGAAAGCTCCTCCCATTGAGAACAAATTGCCTTGCACTCTTGAGGAGATATATAAAGGGACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCTGAGGCCAGTGGTTGGTCTGTGAGGTATTTGAGGAATGGTGATGGTGGATGTTCTCCTGGCTGGAAGAAGGGAACCAAGATCACATTCCCGGAGAAGGGAAACGAACAGCCTAACGTGACGCCTGCAGACCTCGTTTTCATCATCGACGAGAAGCCGCACGGAGTCTTCAGCCGCGACGGAAATGACCTTGTTGTAACACAGAAGATTTCTCTTGCAGAGGCATTAACTGGTTACACAGTTCACCTCACTACCCTAGATGGAAGAAACTTGACCATTCCAATCACCAATGTTATTCATCCCAGTTATGAAGAGGTTGTTCCAAGAGAAGGAATGCCACTTCCAAAAGATCCATCAAAGAAGGGTAACTTGAGGATCAAGTTTAACATCAAGTTCCCAGCTAGGCTCACTGATGAGCAAAAAGCAGGATTCAGGAAACTCTTGAATGCCTAA 1086 0.4733 MGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDSQKRAIYDQYGEEGLKGQVPPPNAGGGGGAGTGATFFSTGDIPGSYQFNPRNADDIFAEFFGFSTPFGGMGGRGGPGGGSGGGGGGGGGGGMRSRFPGGMFGDDMFASFGEGAVHMSQGAPRKAPPIENKLPCTLEEIYKGTTKKMKISREIAEASGWSVRYLRNGDGGCSPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHGVFSRDGNDLVVTQKISLAEALTGYTVHLTTLDGRNLTIPITNVIHPSYEEVVPREGMPLPKDPSKKGNLRIKFNIKFPARLTDEQKAGFRKLLNA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0890 361 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aed5g0890 361 Gene3D - 265 344 - -
Aed5g0890 361 Gene3D DnaJ domain 3 129 IPR036869 -
Aed5g0890 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 270 IPR008971 GO:0006457|GO:0051082
Aed5g0890 361 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aed5g0890 361 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aed5g0890 361 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aed5g0890 361 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aed5g0890 361 CDD DnaJ 4 59 IPR001623 -
Aed5g0890 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 353 IPR008971 GO:0006457|GO:0051082
Aed5g0890 361 Gene3D - 185 263 - -
Aed5g0890 361 Coils Coil 40 60 - -
Aed5g0890 361 MobiDBLite consensus disorder prediction 130 153 - -
Aed5g0890 361 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 359 - -
Aed5g0890 361 CDD DnaJ_C 184 347 - -
Aed5g0890 361 SUPERFAMILY Chaperone J-domain 3 75 IPR036869 -
Aed5g0890 361 SMART dnaj_3 3 62 IPR001623 -
Aed5g0890 361 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aed5g0890 361 Pfam DnaJ domain 4 67 IPR001623 -
Aed5g0890 361 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 359 - -
Aed5g0890 361 Pfam DnaJ C terminal domain 186 344 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0890 Aed-Chr5 6764689 6767366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0890 5 74 C2H2 Transcription Factor Family AT1G74250 39.189 1.38e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0890 K09510 - gmx:100778672 568.155