Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0875 ATGACCACCGCGCTCAGCTACTCACCCTCTCGTATCAAAATCGCCGTCGACGCTCACCACGATCCTCTCTTACCCTTTCTCTGGTTCCTCTCTTTCTCTCTCACGTCTATCAAGAATGCTCTAGAAGCTTCCAACGATTCCGCTCCGAATCTCAGTAACTTACTCAGACATTGCATCACTAACTTCAAGAACAATGACCGCTACCGAAACGACGTCAGATTCCTCAAGATCTGGCTCCTCTATATGGGAGTTAGTGATGATTTTGACAGTGTTTTCAAAGAAATGCTGGACAGTAATGTATGTGCCAATAATTCTTCACTTTATGTGTGGTCTGCAAGTTTTTTTGAGTTGAAGGGAAGATTGCATGATGCTCTCACCATCTATCAGCTTGGCATTTCCAGGAATGTGGAGCCAATTGAGTGGTTGAAGAAGGCACAGACTTTATTCATCAATAGAATTTCTGAAATACAGAATGCTGCTTCAATTCAGAAGGTAGATGATGAAGAATCCAAGAAATTGGAAAATAATGACATTAATCCTTGGGGCACCTCCACCATGGAAAGCTTATTAAAGAAGATATATCCTTTAATTATGAAATTTAATGGGTATCGTTCAAGCACTAAACCATACACAGGAAAGGTGGCTTTATCTACGTTGAAGAATTCATCAAGAAATAAAGTTATAGAGATAGGTGGAATGAAGTACCATATAAAGGGCTGTGCTGGACAGGGTGGTTTTGCCCAAGTATATAAGGCTAATGTCGACAGTGATCCTGACAGTGTTGTTGCACTAAAGATACAAAAACCAGCTTTCCCTTGGGAATTTTACATTTATCGTCAGCTTGATAAGCGCATCTCAGATAGAGAGAGGTCAAGTTATGGTTTTGCTCACCGAATTCATCTGTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGTGATAAACTCATATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAATGGAAATGTTAAATATGATTGACACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCCAGAGATATTTTCAACCCATTGTTTGCATCCTGGTTATTTTATACTCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCAAACACTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGCAAATGCATATGGTCTTTGTGCTATTGTCCATTTGATGTTGCATAATTCCTATATGGAAGTCGTCAAAAAGGAACAATCTGATGGGGGCTACGTGTATCTTCCAAAGCTACCCTTTAAACGTTACTGGAACATCGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCGATACCCCCATGATGATGATAGGAGTTTGCTGCAGGACTTGAAGAAGCCCTTCCAAGACTACATGAGCTCCAATCCACAGCTTATAAAGAAACTAAAGGAGTTACTCTCAAAGCAAAGGGCTTCCTTGTGCTCCGCTTAA 1608 0.4067 MTTALSYSPSRIKIAVDAHHDPLLPFLWFLSFSLTSIKNALEASNDSAPNLSNLLRHCITNFKNNDRYRNDVRFLKIWLLYMGVSDDFDSVFKEMLDSNVCANNSSLYVWSASFFELKGRLHDALTIYQLGISRNVEPIEWLKKAQTLFINRISEIQNAASIQKVDDEESKKLENNDINPWGTSTMESLLKKIYPLIMKFNGYRSSTKPYTGKVALSTLKNSSRNKVIEIGGMKYHIKGCAGQGGFAQVYKANVDSDPDSVVALKIQKPAFPWEFYIYRQLDKRISDRERSSYGFAHRIHLYSDCSILICDYLANGTLQDVINSYVVIGKSMEEVLCIYYTMEMLNMIDTLHGVGLIHGDFKPDNLLIRYARDIFNPLFASWLFYTQGLCLVDWGRGIDLHLFPDQTLFKGDCRTSGFRCIEMLEDKPWKFQANAYGLCAIVHLMLHNSYMEVVKKEQSDGGYVYLPKLPFKRYWNIELWKTFFTKMLNRYPHDDDRSLLQDLKKPFQDYMSSNPQLIKKLKELLSKQRASLCSA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0875 535 Gene3D Transferase(Phosphotransferase) domain 1 233 532 - -
Aed5g0875 535 PANTHER BUB1 KINASE, ISOFORM A-RELATED 17 166 - -
Aed5g0875 535 PANTHER BUB1 KINASE, ISOFORM A-RELATED 156 534 - -
Aed5g0875 535 ProSiteProfiles Protein kinase domain profile. 235 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0875 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Aed5g0875 535 Pfam Protein kinase domain 236 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0875 535 Gene3D - 10 172 - -
Aed5g0875 535 ProSiteProfiles BUB1 N-terminal domain profile. 1 170 IPR013212 -
Aed5g0875 535 SUPERFAMILY Protein kinase-like (PK-like) 234 511 IPR011009 -
Aed5g0875 535 Pfam Mad3/BUB1 homology region 1 13 132 IPR013212 -
Aed5g0875 535 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 17 166 IPR015661 GO:0007094
Aed5g0875 535 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 156 534 IPR015661 GO:0007094
Aed5g0875 535 SMART mad3_bub1_i 12 132 IPR013212 -
Aed5g0875 535 SMART serkin_6 235 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0875 Aed-Chr5 6634840 6641772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0875 234 451 CBL-interacting serine-threonine protein kinases AT4G24400 25.000 1.27e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Aed5g0875 Pkinase 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0875 K02178 - gmx:100783171 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0875 5 6634840 6641772 Aed5g0875 5 6634840 6641772 ECH