Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0854 ATGGCGTCTGGATCCTCGGGTCGCGGCAACTCTGCCTCCAAAGGCTTCGATTTCGCTTCCGATGACATCCTCTGTTCCTACGACGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACACCGATCCGGTAATTGCTCCTAATTCAACTAACGCATATTTACCCATACATATGAGTGTGGTATGTGGATGGGCTCAAGGTATTGGAGTTGCTTCAGGAGATGTGGATTCTGTTGTGGATTTTCACAAATCAAGGATGGCAAGGACATCAATGTTTCCTACTACTGCCTATAATCCACCTGAAGATTCTTTAAGTCAAGATGTGACTGTGACTGTAGAGAAGAGTATGAAAAAATATACTGACAACCTGATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATACTGCTACAACCTTGACAAATCTATTGGAGAAATGAAATCTGATATAAATCGTGACCATGTGGAGCAAGATTCAAGGCTGAAATCTCTTGAAAAGCATCTTCAAGAAGCCCATGGGATCAGTTCCTCTGTCTGTAGTGAGGGTGGGTCTGCTGGTCCAACCCCATGGGGGAAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTGTCTGACACACAGAAAGAACTAGCCAAGCTTCAACATGGTCAGAAAGAATCATCTTCCTCCAGCCATTCACAGTCCAATGAAGAGAGATCTTCACCTACCACAGATCCCAAAAAACCTGACAATGCGTCTGAAGCAAACAACCAGCAGTTGGCTCTTGCCCTCCCTCATCAAATTGTGCCTCAGCCACAGCCTGCAGCGCCCTCGGCTCAGGCTCCAGCACCAAATGTGATTCAAGCCCCTCAACAGCCTTCTTATTACATGCCACCCAGCCCTCTGCCAAATCCAGCCATCCCCCAGAATCAGTATTTATCATCCGATCAACAATATCGAACACCCCAACTTGTGGCTCCACAACCAACACCGTCTCAAGTAACCCCATCTCCACCCATGCAACAATTTTCTCACTATCAACAGCAACAGCCACAACAACAGCAGCCGCCGCAGCAGCAGCAGCAGCAGCAACAGCAATGGTCGCAGCAGGTGCAGCATCCACAGCCAACCCAAATGCAATCTCAAGTAAGACCCCCCTCTCCAAATGTGTACCCTCCATACCAGCCAAATCAAGCAACAAACCAATCACCCACAGAAGCACAAACACTGCCAAACAGCATGGCCATGCAAATGCCATACTCGGGAGTTCCACCACCAGGATCTAGCCGTGTCGATGCCATGCCATATGGATACGGAGGAGCTGGCAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGAGCTCTTTTCCCACACCACCAAGCGACATATATACTGGGAACCTCCCGGCGCTTCCTCCACCTAGTAGTGCATACATGATGTATGATGGCGGTGAGGGAGGAAGAACAACACATCATCAACCCCAACCTCCTCATTTTGCTCAAGCTGGATATCCCCCATCAAGTGCTTCCCTTCAGAACCCTAATCACATGGTCCGAAATCCAAACCAGTCGCAATATGTCCGCAACCATCCCTACAACGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTTGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAACTCGGTGCTTGATAGGTTGAATGTGCATGGCTCTGGGGGTCCTCAGAGAGGATGGTCTGGGTGA 1773 0.489 MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDPVIAPNSTNAYLPIHMSVVCGWAQGIGVASGDVDSVVDFHKSRMARTSMFPTTAYNPPEDSLSQDVTVTVEKSMKKYTDNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSDINRDHVEQDSRLKSLEKHLQEAHGISSSVCSEGGSAGPTPWGKVHRSVQILRDKQELSDTQKELAKLQHGQKESSSSSHSQSNEERSSPTTDPKKPDNASEANNQQLALALPHQIVPQPQPAAPSAQAPAPNVIQAPQQPSYYMPPSPLPNPAIPQNQYLSSDQQYRTPQLVAPQPTPSQVTPSPPMQQFSHYQQQQPQQQQPPQQQQQQQQQWSQQVQHPQPTQMQSQVRPPSPNVYPPYQPNQATNQSPTEAQTLPNSMAMQMPYSGVPPPGSSRVDAMPYGYGGAGRTVPQQPPPQQMKSSFPTPPSDIYTGNLPALPPPSSAYMMYDGGEGGRTTHHQPQPPHFAQAGYPPSSASLQNPNHMVRNPNQSQYVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHGSGGPQRGWSG 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0854 590 MobiDBLite consensus disorder prediction 225 256 - -
Aed5g0854 590 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 78 588 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 210 256 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 210 224 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 339 387 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 291 312 - -
Aed5g0854 590 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 78 588 - -
Aed5g0854 590 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 48 - -
Aed5g0854 590 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 48 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 172 197 - -
Aed5g0854 590 MobiDBLite consensus disorder prediction 325 408 - -
Aed5g0854 590 Pfam UBA-like domain (DUF1421) 536 580 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0854 Aed-Chr5 6446373 6451367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0854 90 300 Trihelix Transcription Factor Family AT5G14540 27.014 6.63e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0854 - - gmx:100782994 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0854 5 6446373 6451367 Aed5g0854 5 6446373 6451367 ECH