Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0819 AGAGAGAGAGAGAGAGAGAGAGTTTCAGAGACAACCTCTTACCTTCGTCATTGTACCTTTCCAAATTTGCCTTTGCCTTTTTTCTTGTTCCCAGCTCCTTCTTTTACAAAGCACTCCTTCAGCAATTGTAACTACTTCTTCTTAGTAAAATTTCAGAACAAATTCTCAGCATTTGCCAACCTTGTTCTGTTCTTCACTTTACTTTTCTACAAGTTGGATTTATTGAGGTGGTGGAAAGTAGCTTCAAGGGAGTTGACCTGGTTCTTCTTCTGTTTGGAGGATGCTTCTGTAATTGGGTTCACTGAGAGGAGTGTGCTGAAGATTAAGGTTGAGGTGGAGATCAATGGGTTGGAAGAGATCTGGTTTGGAGTGGGAGAGAGTAAAGATCTATGGACAAGTTCTACTGGGATTTTTGTTGATCTGCACAATTCAGACTTCAAGTGCATTGCTGCAATTAATAGCTTATATATTGCACTGGGATCCCCTGTTCTGCCTGGGTGGGTTGCTAATGGAGGAGATCCATGCGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGAACATTTATACAAAAAATAGTTCTAAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTGTCAACTTTTGTTTCAATCTCAGTAATTGATCTAAGCAGCAACAACATCGGAGGAAATATTCCATCCAGTTTGCCGGTTACCTTGAAAAACTTTTTTCTTGCTGCCAACCAGTTAACTGGAAGTATTCCGACCTCTTTATCTACTTTGGCTGGACTGACAGACATGTCTCTTAACTACAACTTTTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCTATTGATCAATCTAGATTTATCTCATAATAATTTGAGTGGCGAATTGCCGCCTTCTATGGAAAACTTGGCATCTGTGACCACCCTACGCTTACAGAACAATCAACTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGCCCAATACCTCAAAAGTTGCTAAGCATACCTATCTTCAGACAAGCTGGAAACCCATTTAATGTTAATGGTACTACAGCTCCAGCTTCTCCACCTCGCTCCTCAGCAATAGCACCACCAGGAACTCCTGTCTCTGGGGCACCGCCAGGAACTCCTGTCTCTGGGACACCACCATCTTCTGGCCGAGTACCTACTAAACAGGCTGATGGACCAACTGCAGCAAATGAATCAAATACTGGGAAATCCAAAAAATCCACAAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGCATTTATTCTCTTTATTCCAAGATGTAGTAGAAGAGAAAGGGATGCCAGAAGGTCCAAGCGACATCAAATTGGTGCATATGGGGGTGAAAGGCAAAGTGCCAGGGATTATGGGGCTCCAGCCCAACCACCTATATCAGTAGGGGATGTTCCAAAGCCAAAAGAGGATCATCAAGCAGAGATCAGGAGAACTTGGGTTAATCCTAATCCAAATCCAAATCCACAGGATGAGCAAGAGAAGGATGTGCAAAGAATGGCAACAATACCAAAGCCAGGAGAGCATGAGATAGATATTAGTACACTAGAAGTATATTCAATGCCTCCTCCTCCTCCCCTCCCCCTCCACCCCCACCTCCCTCGACTCCCCCCCCACCACCACCTCCACCTCCTCCTCCTACTACTACTGAGAAGAGGGACTAATGTCAATCCACCCATTAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTTGCCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTGGGTAATGTGTATAGAGCAGAGCTTCCTAATGGCAAGTTACTGGCTGTAAAGAAACTGGACAAGAGAGTCTCTTCACACCAGAAGGATGATGAGTTTCTTAAATTGATAAATAGTATTGACAGCATACGGCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAACATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGATCACTGTTTGATGCACTCCACTCAGATGATGACTTCAAAGCAAGACTCTCATGGAATTCTCGTATTCGGATAGCACTTGGGGCAGCTAGAGCCTTAGACTTTGGAGTGATTATGTTAGAGCTTTTGACTGGCCGTCAGTCTCATGATAGGACACAACCACGAGGGGAGCAATTTCTGGTCAGATGGGCCGTTCCCCAACTACATGATATCGATGCATTATCAAGGATGGTTGATCCTTCATTAAATGGAAAATACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTGCCTGTTCGGCCTATATTTTGGATCGAGTACAATGCATTTGAAGCCTTGA 2445 0.4303 RERERERVSETTSYLRHCTFPNLPLPFFLFPAPSFTKHSFSNCNYFFLVKFQNKFSAFANLVLFFTLLFYKLDLLRWWKVASRELTWFFFCLEDASVIGFTERSVLKIKVEVEINGLEEIWFGVGESKDLWTSSTGIFVDLHNSDFKCIAAINSLYIALGSPVLPGWVANGGDPCGEGWQGIQCNGTFIQKIVLNGANLGGELGDKLSTFVSISVIDLSSNNIGGNIPSSLPVTLKNFFLAANQLTGSIPTSLSTLAGLTDMSLNYNFLTGEIPDAFQSLTLLINLDLSHNNLSGELPPSMENLASVTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPQKLLSIPIFRQAGNPFNVNGTTAPASPPRSSAIAPPGTPVSGAPPGTPVSGTPPSSGRVPTKQADGPTAANESNTGKSKKSTKRVVWISIASVLGFIILLLAFILFIPRCSRRERDARRSKRHQIGAYGGERQSARDYGAPAQPPISVGDVPKPKEDHQAEIRRTWVNPNPNPNPQDEQEKDVQRMATIPKPGEHEIDISTLEVYSMPPPPPLPLHPHLPRLPPHHHLHLLLLLLLRRGTNVNPPIRSSVPPPTFAKFFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKLLAVKKLDKRVSSHQKDDEFLKLINSIDSIRHANVVELVGYCSEHGQRLLIYEYCSNGSLFDALHSDDDFKARLSWNSRIRIALGAARALDFGVIMLELLTGRQSHDRTQPRGEQFLVRWAVPQLHDIDALSRMVDPSLNGKYPAKSLSNFADIISRCLQCLFGLYFGSSTMHLKP 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0819 814 Gene3D Transferase(Phosphotransferase) domain 1 596 729 - -
Aed5g0819 814 Pfam Protein tyrosine and serine/threonine kinase 618 730 IPR001245 GO:0004672|GO:0006468
Aed5g0819 814 ProSiteProfiles Protein kinase domain profile. 615 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0819 814 MobiDBLite consensus disorder prediction 457 498 - -
Aed5g0819 814 PANTHER OS01G0253100 PROTEIN 134 730 IPR045271 GO:0004714|GO:0006468
Aed5g0819 814 PANTHER OS01G0253100 PROTEIN 730 798 IPR045271 GO:0004714|GO:0006468
Aed5g0819 814 SUPERFAMILY Protein kinase-like (PK-like) 590 798 IPR011009 -
Aed5g0819 814 MobiDBLite consensus disorder prediction 363 425 - -
Aed5g0819 814 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 134 730 - -
Aed5g0819 814 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 730 798 - -
Aed5g0819 814 SUPERFAMILY L domain-like 172 348 - -
Aed5g0819 814 Gene3D Ribonuclease Inhibitor 149 362 IPR032675 -
Aed5g0819 814 Pfam Leucine rich repeat 234 293 IPR001611 GO:0005515
Aed5g0819 814 Gene3D Transferase(Phosphotransferase) domain 1 730 800 - -
Aed5g0819 814 MobiDBLite consensus disorder prediction 396 425 - -
Aed5g0819 814 MobiDBLite consensus disorder prediction 373 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0819 Aed-Chr5 6168569 6176225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0819 730 798 Strubbelig Receptor Gene Family AT4G03390 82.609 8.59e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed5g0819 PK_Tyr_Ser-Thr 3.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0819 - - mtr:MTR_4g046113 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0819 5 6168569 6176225 Aed5g0819 5 6168569 6176225 ECH
Aed1g0845 1 9158192 9164175 Aed5g0819 5 6168569 6176225 PCT