Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0806 ATGACTATTGGTTCCTTCTTCATCAGGGCCTCCAGGGTTCTGAATTCCTCCAACTTTCTGCTTCTCTGCACTCTCAGTGGTGGTGGTGTAGTGGCATACTCCGAATCACAGTCAGGAGCTGAACGTCCTAGTATTGATGCTAATGAGCCCTCCAAAAAGAAAGTAGTGGTTCTTGGAACCGGATGGGCTGCTACCAGTTTTCTTAAGGATCTGGATGCTTCATTATATGATGTTCAAGTTGTTTCACCTCGTAACTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTGGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAGTGAATTTTTGTGAGGCAGAATGTGTCAAGATTGATTCTGCTAACAAAAAGGTTTTTTGTCGGTCCAATATTGAAAACTTGGTGGGAAGTGGCGAATTTTCCTTGGACTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTAAATACTTTTAACACCCCTGGTGTTAAGGAAAATTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATTAGACTGTCTGTGATTGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCAGATGATGAGCGTAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGTCCAACTGGTGTGGAATTTGCTGCAGAGCTGCATGATTATGTCCAAGAAGATTTAATCAAACTATATCCAACTGTTAACGATAAAGTGAAAATAACATTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCGTTTGCTGAGCAAAAGTTTACGAGAGACGGGATAGAAGTTCAAACAGGATGCCGGGTTGTCGCTGTTAATGACAGGGATATTACAGTGAAGGAAAAATCAACTGGAAAGGTTTGCTCGGTGCCACATGGGTTGGTTGTCTGGTCAACTGGCATTTCAACTCTTCCAGTTATAAGGGACTTTATGGAAGAAATTGGTCAGGTTAAAAGACATGTACTAGCAACCAATGAATGGTTGCATGTGAGGGGATGTGAAGATGTGTATGCCATTGGTGATTGTTCTAGCATAACTCAACGTAAAATCATGGATGATATCACAGCCATATTTGAGGCTGCAGACAAAAATAAGTCTGGCACCTTAACTATTGAAGAATTCCAGGAGGTGATGGATGATATTATCTTAAGATATCCACAAGTTGAGCACTATCTAAAGCAGAAACATCTGCGTGATTTTACCACTCTGTGGAAAGATTTACAAGGGAATGAAAGCAAGGAAATAGACATCGAAGCGTTTAAGCTGTCCCTTTCTCACGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGATGCTTTAACCGCAGGGATCATGTTGAAGAGAATCCTGAGGGTCCTCGACGATTTACTGGAACTGGACGTCATAAGTTTCTTCCCTTCAGGTATAGGCATTTGGGGCAATTTGCTCCACTGGGTGGGGAACAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAGTAGTGGAGGACTAGTGGCATATTGCGATGGCAAACCAGAATATGGTAATGAAATTGGTTCAAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCCGGAACTAGTTTTTTGAAAAATATAAAAAGCAACTCCTATGATATTCATGTGGTTTCACCACGTAACTATTTTGCATTCACTCCATTGCTTCCAAGTGTCACGTGTGGCACTGTGGAAGCAAGAAGCGTCGTTGAACCCATTCGCATTACTTACAAGGAGAAGTCTGTGTTTGTTGAACAGAGCGGTGTAAATATTAGTTTCAGTGAAGCTGAATGCTATAAGATCGATCACAAGAACAACAAAGTTTATTGCCGTGCTGGTAAAGACAAAAAAATGGGTGGCTTAGAAGAATTTTCCATTGATTATGATTACCTGGTTATAGCTATGGGAGGCCGTTCTAATACCTTCAACACACCTGGTGTTGAGGAGCATGCCCATTTCTTGAAGGAAGTGGATGAAGCTCTAAAAATCCGTCAAAGAGTGGTTGATCTTTTTGAAAGAGCTAGCCTTCCTTCTTTACCAGTGGAAGAGAAGAAAAGACTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTGGAGTTTTCTGCTGAGCTTCATGACTTTGTACTTGAGGATATGGCTAAGTTTGACAAGAGAATTACAGAATTTGCTGAACAGAAGTTCGCCAGAGATGGCATTGATGTGAGATTGGGAGCTATGGTTGTCAAAGTTGGTGAAAACGATATCACTGCCAAAGAAAGGTCAACTGGTCAAATTGTTTCTATACCTCATGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAACTAGTTGAATTTATGAAGCAGCTTGGCCAGGTTAATAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTGGAAGGACCTGACAACATCTATGCTCTAGGTGATTGTGCCACTATAAATCAACGTAAAGTTATGGAAGATATAGCCGTGATATTTGGCAAGTCTGACAAGAAAAATTCTGGAAAATTAGATCTTAAAGAATTTAAAGAAGTTGTTGGCGACATTATTGAGAGGTATCCACAAGTGGAGATTTATTTGAAGAAGAACCAAATGAGAGACATGGCTAGCTTGCTAAAGAAATCTCAAGAAAGCAATATTACAGTGGACATTGAATACTTCAAAGAAGCCCTTTCTAAAGTAGACTCTCAGATGAAAAATCTTCCTGCAACGGCCCAGGTAGCTGCACAACAAGGAGTGTATCTTGCAGACTGTTTCAACCGCATGGAGGAATGTGAGAAGTATCCAGAAGGCCCTCTCAGGTTCAGAGGAGTTGGACGCCATCGGTTCCATCCCTTTAGGTTTGGCTAA 3021 0.4204 MTIGSFFIRASRVLNSSNFLLLCTLSGGGVVAYSESQSGAERPSIDANEPSKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEVNFCEAECVKIDSANKKVFCRSNIENLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSLSDDERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVNDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVQTGCRVVAVNDRDITVKEKSTGKVCSVPHGLVVWSTGISTLPVIRDFMEEIGQVKRHVLATNEWLHVRGCEDVYAIGDCSSITQRKIMDDITAIFEAADKNKSGTLTIEEFQEVMDDIILRYPQVEHYLKQKHLRDFTTLWKDLQGNESKEIDIEAFKLSLSHADSQVKSLPATAQVAAQQGAYLARCFNRRDHVEENPEGPRRFTGTGRHKFLPFRYRHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASSSGGLVAYCDGKPEYGNEIGSKKKVVVLGTGWAGTSFLKNIKSNSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRITYKEKSVFVEQSGVNISFSEAECYKIDHKNNKVYCRAGKDKKMGGLEEFSIDYDYLVIAMGGRSNTFNTPGVEEHAHFLKEVDEALKIRQRVVDLFERASLPSLPVEEKKRLLSFVVVGGGPTGVEFSAELHDFVLEDMAKFDKRITEFAEQKFARDGIDVRLGAMVVKVGENDITAKERSTGQIVSIPHGMVVWSTGIGARPELVEFMKQLGQVNRRALVTDEWLRVEGPDNIYALGDCATINQRKVMEDIAVIFGKSDKKNSGKLDLKEFKEVVGDIIERYPQVEIYLKKNQMRDMASLLKKSQESNITVDIEYFKEALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMEECEKYPEGPLRFRGVGRHRFHPFRFG 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0806 1006 SUPERFAMILY FAD/NAD(P)-binding domain 52 270 IPR036188 -
Aed5g0806 1006 PRINTS FAD-dependent pyridine nucleotide reductase signature 846 868 - -
Aed5g0806 1006 PRINTS FAD-dependent pyridine nucleotide reductase signature 680 698 - -
Aed5g0806 1006 PRINTS FAD-dependent pyridine nucleotide reductase signature 570 589 - -
Aed5g0806 1006 PRINTS FAD-dependent pyridine nucleotide reductase signature 741 759 - -
Aed5g0806 1006 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 379 IPR023753 GO:0016491
Aed5g0806 1006 Pfam EF hand 382 403 IPR002048 GO:0005509
Aed5g0806 1006 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Aed5g0806 1006 PANTHER NADH DEHYDROGENASE 768 1005 IPR045024 GO:0003954|GO:0006116
Aed5g0806 1006 PANTHER NADH DEHYDROGENASE 547 768 IPR045024 GO:0003954|GO:0006116
Aed5g0806 1006 PANTHER NADH DEHYDROGENASE 15 546 IPR045024 GO:0003954|GO:0006116
Aed5g0806 1006 SMART efh_1 378 406 IPR002048 GO:0005509
Aed5g0806 1006 SMART efh_1 878 906 IPR002048 GO:0005509
Aed5g0806 1006 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Aed5g0806 1006 ProSiteProfiles EF-hand calcium-binding domain profile. 874 909 IPR002048 GO:0005509
Aed5g0806 1006 SUPERFAMILY FAD/NAD(P)-binding domain 742 871 IPR036188 -
Aed5g0806 1006 Gene3D - 42 427 - -
Aed5g0806 1006 Gene3D - 560 767 - -
Aed5g0806 1006 Gene3D - 768 890 - -
Aed5g0806 1006 Gene3D - 446 551 - -
Aed5g0806 1006 Pfam Pyridine nucleotide-disulphide oxidoreductase 568 876 IPR023753 GO:0016491
Aed5g0806 1006 SUPERFAMILY EF-hand 375 946 IPR011992 -
Aed5g0806 1006 SUPERFAMILY FAD/NAD(P)-binding domain 217 371 IPR036188 -
Aed5g0806 1006 PANTHER - 547 768 - -
Aed5g0806 1006 PANTHER - 768 1005 - -
Aed5g0806 1006 PANTHER - 15 546 - -
Aed5g0806 1006 SUPERFAMILY FAD/NAD(P)-binding domain 567 762 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0806 Aed-Chr5 6076792 6086389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0806 5 545 Chloroplast and Mitochondria Gene Families AT4G21490 62.000 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0806 K03885 - gmx:100793566 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0806 5 6076792 6086389 Aed5g0806 5 6076792 6086389 ECH