Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0795 ATGGTAAGGGCTCCTTATTTTGATAAAAATGGAATAAAGAAAGGTGCATGGAGTGAGGATGAGGATCAGAGGCTTATTGCTTATGTTGACATACATGGCCATCCCAATTGGCGTCAACTACCAAAGCTTGCAGGTTTATGGTCTCTAATGGCTGAACATCTACCTGGAAGAACAGACAACGAGATAAAGAACCATTGGCACAGTCACCTAAAGAAGTTCCTAAAGGACAATGAGAAAAACACCCCTTGTGATGATGCTGATGCTGATGAAGAGTTGATGAAGTCCACTGAATGCAAAGAATATGATGAGAGGCCAATAAACGAGGCTCTTACTGCTGATTCCCACCACATTCTGGAGAGTTCAGTGTCAATTTCCTCAGAAACTTCCTACACTGAAGACAATTCCCCTTCATTCTCCTCTAGTCATACAACAGAATCATCAAACCTTAACTTTTCCAAGGAAGAAGATAGTGTTGCTCCATGGGAAACAACATTGGATACATTTAGTAGCAATTTCTGGACTGAACCGTTTATTTCAGAAGATGCTTTTAGTCAGGACTACTATCCCATTATTTCCTCTTACGGAACAGAACCATTTTTCTTGTGGTAG 609 0.4072 MVRAPYFDKNGIKKGAWSEDEDQRLIAYVDIHGHPNWRQLPKLAGLWSLMAEHLPGRTDNEIKNHWHSHLKKFLKDNEKNTPCDDADADEELMKSTECKEYDERPINEALTADSHHILESSVSISSETSYTEDNSPSFSSSHTTESSNLNFSKEEDSVAPWETTLDTFSSNFWTEPFISEDAFSQDYYPIISSYGTEPFFLW 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0795 202 MobiDBLite consensus disorder prediction 125 155 - -
Aed5g0795 202 ProSiteProfiles Myb-like domain profile. 9 70 IPR001005 -
Aed5g0795 202 CDD SANT 16 70 IPR001005 -
Aed5g0795 202 SMART sant 13 72 IPR001005 -
Aed5g0795 202 SUPERFAMILY Homeodomain-like 9 77 IPR009057 -
Aed5g0795 202 MobiDBLite consensus disorder prediction 125 154 - -
Aed5g0795 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 74 IPR017930 -
Aed5g0795 202 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 47 194 - -
Aed5g0795 202 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 46 - -
Aed5g0795 202 Pfam Myb-like DNA-binding domain 14 70 IPR001005 -
Aed5g0795 202 PANTHER MYB TRANSCRIPTION FACTOR 47 194 - -
Aed5g0795 202 PANTHER MYB TRANSCRIPTION FACTOR 1 46 - -
Aed5g0795 202 Gene3D - 12 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0795 Aed-Chr5 6004463 6006118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0795 1 74 MYB Transcription Factor Family AT1G06180 43.103 1.53e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g0795 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0795 K09422 - gmx:100781032 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0795 5 6004463 6006118 Aed5g0795 5 6004463 6006118 ECH