Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0790 ATGTGGGATAAAGTTTTTTTTCCTTTCACTATCAGATGGTCCGCCATAGCTGCAAGGATGCCAGGAAGAACAGACAACGAAATAAAAAACCATTGGCACACAAACCTCAAAAAGCGGTCTCAACAAGAAGAAGAAGAAGAAGCTGATCAGGTCTCAAATTCATCTACTGAACCAACTGAAAACACTTTCCAAGATTGTTCCTCCACAACAGCAACGACAAGCACGGAATGTTGTACTACTACTGTCACCGCCACCAGCAACGAAAACCTGGTGCTTCTGGAAGATGAGTTTGCCTTTTGGAATGCAGACACAGATCTTATAACTGGTAATTTCTGGCTAGAAGATTCCTATAATAATATGCTTGACATTAATTCCTACGTCCCTAGTGAACCAGAGTACTTTAGCCAAGTGTTTGATGTAGAACTTTGGAGCCATGATATATAA 444 0.4077 MWDKVFFPFTIRWSAIAARMPGRTDNEIKNHWHTNLKKRSQQEEEEEADQVSNSSTEPTENTFQDCSSTTATTSTECCTTTVTATSNENLVLLEDEFAFWNADTDLITGNFWLEDSYNNMLDINSYVPSEPEYFSQVFDVELWSHDI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0790 147 Gene3D - 7 65 - -
Aed5g0790 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 40 IPR017930 -
Aed5g0790 147 MobiDBLite consensus disorder prediction 52 74 - -
Aed5g0790 147 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 12 81 - -
Aed5g0790 147 MobiDBLite consensus disorder prediction 37 74 - -
Aed5g0790 147 ProSiteProfiles Myb-like domain profile. 12 36 IPR001005 -
Aed5g0790 147 SUPERFAMILY Homeodomain-like 11 42 IPR009057 -
Aed5g0790 147 CDD SANT 10 36 IPR001005 -
Aed5g0790 147 Pfam Myb-like DNA-binding domain 12 36 IPR001005 -
Aed5g0790 147 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0790 Aed-Chr5 5953096 5953539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0790 5 73 MYB Transcription Factor Family AT1G16490 43.478 1.23e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g0790 Myb_DNA-binding 4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0790 K09422 - gmx:100778518 166.007