Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0783 ATGAAGAAGTGCGAACTGTGCAAGGGTCCGGCGAGGATTTTCTGCGAGTCGGACCAGGCAAACTTATGCTGGGACTGCGACGTCAAGGTTCACAGCGCCAACTTCTTGGTCGCCAGGCACGCACGCACACTCCTCTGCCGCACGTGCCGCACTCCCACGCCATGGAAAGCCTCCGGCTACGCATTCACCGCCGCCGCATCTTTCTGCCACCGCTGCTCCGCCCCCGAGGCCAGCGAACCCGACAATGACGACGATTCAGACACCGACGACGACGAAGATTCCGACGATCTCGCCGGTGATGAGGACGTCAACAACCAGGTCGTGCCGTGGTCCCCCTCCACTCCGCCTCCCCCTCCGTCGAGCTCCTCCGGCAGCGAGTGGTCGGAGTGTAGAAACGTTAACGCTTCTGAACCGGAAAGAACAGCGTCCACGACGAAACGACAGCGCGAGGAGGACGATGATGCTGCTTCCGATCGTGATCACAGCAGGGGGTCAGAACTCAGAAGGGTTGCGCGTTTCAACGGAGGTGGTGGCGTGTGA 540 0.613 MKKCELCKGPARIFCESDQANLCWDCDVKVHSANFLVARHARTLLCRTCRTPTPWKASGYAFTAAASFCHRCSAPEASEPDNDDDSDTDDDEDSDDLAGDEDVNNQVVPWSPSTPPPPPSSSSGSEWSECRNVNASEPERTASTTKRQREEDDDAASDRDHSRGSELRRVARFNGGGGV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0783 179 MobiDBLite consensus disorder prediction 123 141 - -
Aed5g0783 179 Pfam B-box zinc finger 2 41 IPR000315 GO:0008270
Aed5g0783 179 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Aed5g0783 179 MobiDBLite consensus disorder prediction 142 168 - -
Aed5g0783 179 MobiDBLite consensus disorder prediction 79 100 - -
Aed5g0783 179 CDD Bbox1_BBX-like 3 45 - -
Aed5g0783 179 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 171 - -
Aed5g0783 179 MobiDBLite consensus disorder prediction 74 179 - -
Aed5g0783 179 PANTHER - 1 171 - -
Aed5g0783 179 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0783 Aed-Chr5 5899205 5900516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0783 2 74 C2C2-CO-like Transcription Factor Family AT5G54470 64.384 7.56e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed5g0783 zf-B_box 7.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0783 - - gmx:100782655 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0885 1 9378217 9380258 Aed5g0783 5 5899205 5900516 PCT