Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0775 ATGGAATTGACAAGACGTAGTTATGCGATTGTTTATGTCATTCTCCTTTGTGCGTTGGCTCAAGGGGGCTCAGAAGGAAAGGGGGGGAAGGAAGAGGAGATTTTTAGAGATGGTGGAGGAGGAGAACCTTTCTCACCATCATCCATTTATTATGTGCAGCCAATTAAGGTAGAAAATGAATTGAAACATTGCAGGAAAGAATTGATAGAGAGGAACAATGACTTGTTGCATTCCCTGGAAAGGAGCAGTGACAAAGAAACTAAGTCTCTGCAGCCTCTTCATATGAAAAGAAAAACTTTGGAGTTGGACTGCATAAAAACTAGTACTACTCCTCCTGCTCCTGTTTCAGAAAAGAGTAGCTCTAGATATTTGTTGATAAAGAATTCTGGATCAACCTTGGGTGTGGAAAGTGGTCATGGGAGAAATTTGATTGATTCTGATTCACCAGATAATAAAAATGCACCAAGTCCTTCTGCTACTGCTGAATCACCAAGTAATGATTCAAAAGGATCAACACCAACCAGTTCTCCACCATCACCAACTAAATCATCACCATCTCCATCATCACCAACTAAATCATCTCCACCATCACAACCTAAATCATCACCATCTCCACCATCACCAACTAAATCATCACAGACTTCAAGTTCCAAAGGTGATGATTTACCACTCCCTCCAGATATGTTTGTGCCATTTCCACCACCACCACCACCCCGGGTATCTCGTTCAGCTCCTCAAGATTCTCAACCTACAGCAGATGCTCCTCCACCACCTGACAATGAAAACAAAAAGAAGCAAACAATTATTTTAGCTATCTCTGTATCAGGAATTGTAATCATGATAGGCTTGGCCCTCTGCTGTTGTGAGGCCAGAGGCAACAAAGATGACAGGGATGACAGGCCTTTGCTCGTATTAACCTCAAGTGATTATACTGGTGGTTCAAAGAAGGTTGTTCGGTTGGGAGATGCTGACAAGGAAGAAGAATATGACACTGGCAATGGAAAGAAAGGCCTTGGCAGTGGAAAGAGACATTCTAGTTTTGGAAATTGGTCCATTAGGGGTGGACATAAGTCACAAAACAAAATGTCACTGGCTGAGACAACAGCATCAGAAGGTGTAGGAAAAGTACCAGTGGCTCCTAATGGAATAGCTGCCCCTCCACCTCCACCTCCACCACGACCACCACCTCCACCTCCACCACCACCACCACTGCCTCCACGTTCACATCCACCTCCACCTCCATCTCAACCTCTAAGAACACCACCACCACCGGTTCTGAAGCGGCCAGCACCACCTGCTCCTCGTGCACCGCCACCTCCAAAAGGTGCTCATGCTCCACCTGCTCCTCCCAAACTAATGGGAGGTAAGAATCAAGGTCCACAAGATGCAGAAGAAGGAACTTCCGGTGAGGGTGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCAGGCCAATCAATGGTGTGGCATGAGATCAGTTCAGGATCATTCGTGATCAACGAGGAAATGATGGAGTCTTTGTTTGGCTGCACCAACCAGAATAAGAATGAACGTAAAAAGGATTCACCACAAGTAGATACTTCAGTGCAGTATATTCAGATTATTGACCCTAAGAAAGCACAGAACTTATCAATTCTTCTGCGAGCTCTGAATGTGACAACAGCAGAAGTTATTGATGCTCTTCAAGAAGGTCATGAGCTTCCGGTGGAGCTCATCCAGACATTGTTGAAGATGGCACCAACAACAGATGAGGAACTGAGGCTAAGGCTATTCACAGGAAGCCTTTCAGAACTAGGCCCTGCAGAGAGGTTTCTCAAAGTGCTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAAGCTCTCATGTTCATGTTTATGCTTAAAGAAGAGTTCCCAAGCCTTAAGGATTCCTTTGCCACATTAGAGGTTGCAAGCCACGAGCTAAGAAAAAGCAGGCTATTCCTAAAACTTCTAGAGGCAGTTCTGAAAACCGGGAACCGCATGAACGACGGAACCTACCGCGGAGGAGCACAGGCGTTTAGGCTGGACACCCTCCTCAAACTCTCCGACGTAAAAGGAACAGACAGCAAGACAACACTCCTACACTTCGTGGTACAGGAAATCATCCGCTCCGAGGGAATACGAGCGGTGCGAACAGAAAGAGCGACCAGAAGCACTTCCAGCATCCGAACCTGCGGCGACGAAGAGACCGACGCAGCATCCAATGAGTCCGAGGCGCATTACCGCGACCTCGGACTCCAGGTGATCTCCGGGCTAAGCACCGAGCTCGAAGACGTGAGAAAGGCCGCGCATGTAGACGGCGATGCGATCAGCATCTCCGTCTCGAAGCTCGCACACTCCGTGGTGAAGACTAGGGAGTTCTTGGACACGGAAATGAAGAGCCTCGACGAAGAGAGCGAGTTCCAGCGCAGCATGGAGGTGTTCATGGAGAAAGCCACGGGAGAGGTGACGTGGCTGGTGAATGAAGAGAAGAGGATAATGGCGTTGGTTAAGAGCACTGCCGATTACTTCCACGGCAACGCGGGAAAGGACGAAGGCTTGCGTTTGTTCCTCATCGTGCGTGATTTCTTGGTCATATTGGACAAGGTTTGCAGAGAGGTGAAGGAAGCCACCGCCAAGTTAGCGAAAGCTTCGACCGATAAGATTAACACGAAAGAGACTCCTAGGAGTTCGGTTTCTTCTTCGCCAACCGCGCGTAGCCAAATCTCGCCAACTGCGCCGTCTGACATGCACAGAAGGCTGTTTCCGGCGATCACGGAGCGGAGAATGGATTACTCTAGCTCTGATTCTGATTCTGATTCTGATGACGACGACGACTTTTAA 2865 0.4761 MELTRRSYAIVYVILLCALAQGGSEGKGGKEEEIFRDGGGGEPFSPSSIYYVQPIKVENELKHCRKELIERNNDLLHSLERSSDKETKSLQPLHMKRKTLELDCIKTSTTPPAPVSEKSSSRYLLIKNSGSTLGVESGHGRNLIDSDSPDNKNAPSPSATAESPSNDSKGSTPTSSPPSPTKSSPSPSSPTKSSPPSQPKSSPSPPSPTKSSQTSSSKGDDLPLPPDMFVPFPPPPPPRVSRSAPQDSQPTADAPPPPDNENKKKQTIILAISVSGIVIMIGLALCCCEARGNKDDRDDRPLLVLTSSDYTGGSKKVVRLGDADKEEEYDTGNGKKGLGSGKRHSSFGNWSIRGGHKSQNKMSLAETTASEGVGKVPVAPNGIAAPPPPPPPRPPPPPPPPPPLPPRSHPPPPPSQPLRTPPPPVLKRPAPPAPRAPPPPKGAHAPPAPPKLMGGKNQGPQDAEEGTSGEGDAPKPKLKPFFWDKVNAKPGQSMVWHEISSGSFVINEEMMESLFGCTNQNKNERKKDSPQVDTSVQYIQIIDPKKAQNLSILLRALNVTTAEVIDALQEGHELPVELIQTLLKMAPTTDEELRLRLFTGSLSELGPAERFLKVLVDIPFAFKRLEALMFMFMLKEEFPSLKDSFATLEVASHELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDSKTTLLHFVVQEIIRSEGIRAVRTERATRSTSSIRTCGDEETDAASNESEAHYRDLGLQVISGLSTELEDVRKAAHVDGDAISISVSKLAHSVVKTREFLDTEMKSLDEESEFQRSMEVFMEKATGEVTWLVNEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLVILDKVCREVKEATAKLAKASTDKINTKETPRSSVSSSPTARSQISPTAPSDMHRRLFPAITERRMDYSSSDSDSDSDDDDDF 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0775 954 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 900 IPR015425 -
Aed5g0775 954 MobiDBLite consensus disorder prediction 147 177 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 893 954 - -
Aed5g0775 954 SUPERFAMILY Formin homology 2 domain (FH2 domain) 537 899 - -
Aed5g0775 954 SMART it6_source 468 889 IPR015425 -
Aed5g0775 954 Coils Coil 874 894 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 344 367 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 928 943 - -
Aed5g0775 954 Pfam Formin Homology 2 Domain 472 873 IPR015425 -
Aed5g0775 954 MobiDBLite consensus disorder prediction 898 921 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 178 206 - -
Aed5g0775 954 PANTHER FORMIN-RELATED 409 947 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed5g0775 954 PANTHER FORMIN-RELATED 1 411 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed5g0775 954 MobiDBLite consensus disorder prediction 381 447 - -
Aed5g0775 954 PANTHER FORMIN-LIKE PROTEIN 409 947 - -
Aed5g0775 954 PANTHER FORMIN-LIKE PROTEIN 1 411 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 325 480 - -
Aed5g0775 954 Gene3D Formin, FH2 domain 474 907 IPR042201 -
Aed5g0775 954 MobiDBLite consensus disorder prediction 226 243 - -
Aed5g0775 954 MobiDBLite consensus disorder prediction 131 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0775 Aed-Chr5 5829702 5834677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0775 433 938 FH2 protein (formin) Gene Family AT5G54650 58.398 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0775 - - gmx:100816477 776.548