Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0763 ATGGTTGAACGGAAGCAGTTCAAGACTAAGCTCTGCGTTCTGTATCAGAGAGGTCGCTGCAATCGCCATAATTGCTCCTTCGCGCATGGGAGAGCCGAGCTTAGACGATTCTCTGCCTCGTATAGTGGACGATCACATTATCTTGTTGAGACTGTTGCATTTCCAGAAGCTTGCGTGGATTGTCTGCTAGCATCGTGTTTTGATCAGAAGCAAGTTCAGCAAATTCCCCAATCATTTCATTTAAAATTTCTACTGCTTGAGTGTATGGAGCTTATGCTATTCCTTTTGGCTGATACTTCTGGATATGGGAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCATATATCTCCTCGAAGGTACTCACCAGCTCCAGATACCAGAGGCCGCCAGATCATCCGTGAATACAGTCCTTCGAGGTCTTTGGAGAAAAAAAGTGACAGAAGACACAGGAGAAAACAGGGTATTACTGATCAAAGTGATGTTTCTGGAAGTTTGAAAGTATCGGATAGAGTTCAAGATCGAATTAAAGAAGGAAAATTGCTTTCCTCTGGTTCTAGGAATACTCTTGAGGAGCAGCTCAAGAAAGTAGATTCAGATATCAGCACTCTTGAGAACCGAAAATTCCAGCTAGAGATCTTCCTTGATGAGAGTGTTCGAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAATTATGCAAAGAGGATGGGGAGTGCAAAAGATCACAAGTCCGACTTCAAAGGTTTGGAGATCAGCTTGGCTCAGACATTTCTAGAATTGGTGGCAATGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAAAATACTGGTCTTCCTCCAATTGTCAAACATAATGTGGAGCACAACGATGCATCTTCCCACAGAAAAAGGCTGCATATTGAACATGATGCTTTGGAAGAGTTAAAAAAAGATAGATCAAAAGATGGGCATTTGGTTGAGACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATTTATCTGATCAAATGAATGACGAGTCCTTCGCGACTCCAGACAACGGAACTGAAGTTACTAGACCTGTAGATTTTGAAGGCAATCACAAGAAAGGATTGAAGCAACCAAGGATTGAAGCGCCATCAACCAGCATGGCAGCTCATGTGGTTGACGAGGATGTTGATATTGAACGTTATGATGGAAATGAAACTGCAAATACGGAAAATGATAATGGAGCAGCATATAAGGTGAAGGGTGCACCACTTATGCTTCCCCCAGCTTTGATACCTCGTAGCAATTATTCGCAGTATGAGGGTAATGACGAGAATGTTGATGTGGATGGTTGA 1353 0.4228 MVERKQFKTKLCVLYQRGRCNRHNCSFAHGRAELRRFSASYSGRSHYLVETVAFPEACVDCLLASCFDQKQVQQIPQSFHLKFLLLECMELMLFLLADTSGYGRRDYLGNDLRDKLDRRHISPRRYSPAPDTRGRQIIREYSPSRSLEKKSDRRHRRKQGITDQSDVSGSLKVSDRVQDRIKEGKLLSSGSRNTLEEQLKKVDSDISTLENRKFQLEIFLDESVREVDSLNSRIQELEAQLCKEDGECKRSQVRLQRFGDQLGSDISRIGGNEEDLSIDIVSNGENTGLPPIVKHNVEHNDASSHRKRLHIEHDALEELKKDRSKDGHLVETARTRKRSRWNLSDQMNDESFATPDNGTEVTRPVDFEGNHKKGLKQPRIEAPSTSMAAHVVDEDVDIERYDGNETANTENDNGAAYKVKGAPLMLPPALIPRSNYSQYEGNDENVDVDG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0763 450 Coils Coil 192 212 - -
Aed5g0763 450 Coils Coil 220 240 - -
Aed5g0763 450 MobiDBLite consensus disorder prediction 119 173 - -
Aed5g0763 450 Gene3D - 1 36 - -
Aed5g0763 450 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Aed5g0763 450 MobiDBLite consensus disorder prediction 347 376 - -
Aed5g0763 450 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 102 449 IPR045868 GO:0046872
Aed5g0763 450 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 48 IPR045868 GO:0046872
Aed5g0763 450 SUPERFAMILY CCCH zinc finger 4 35 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed5g0763 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0763 - - gmx:100811131 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0763 5 5700666 5708635 Aed5g0763 5 5700666 5708635 ECH