Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0760 ATGGGGAACCAGAGTTACTTGAAGGCTTTGATTATTTGTCTTATAGCAGTAATTGGATCAACTCAAGCTCAATTGCAGCCTGGTTTCTATGCCAAAAGCTGTCCAAAGGCAGAGAAAATAATTTTGAAGTATGTTATTGAGCATACCCGCAATGCTCCATCACTAGCAGCTGCCCTCATAAGAATGCACTTCCATGATTGTTTTGTCAATGGGGGACCCTATTGGAATGTTCCAACAGGTCGAAGGGATGGGGTAATCTCTAAAGCAGCAGAGGCATTGCTCAACTTGCCTGCTCCATTTCACAACCTCACCACCCTCTTAACACTCTTTGGCAATGTTGGACTTGATGCAAACGACCTTGTCTTGCTTTCTGGTGCTCAAACGATTGGTGTTTCCCATTGCTCATCAATTGCAACCCGTTTACACAATTTCACTGGCAAAGGTGACACAGACCCAACACTAGACAGTGAATATGCAAAAAATCTCAAGACCTTTAAGTGCAAGAACATCAATGACAACACTACACTTATTGAGATGGACCCTGGAAGCTGTGACACATTTGACCTCGGCTATTACAAACAAGTGGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGCATTGCTTGAAAGCTTTACCACAAGGGCTATTATCGCCAAACAACTTCAATCAACTCAAGGATTCTTTGCAGAATTTGCTAAGTCTATGGAGAAAATGGGACGAATTAATCTCAAGATTGGAGCAGATGGGGAGATAAGGAAACATTGTGCAAGAGTAAATAACTAA 786 0.4211 MGNQSYLKALIICLIAVIGSTQAQLQPGFYAKSCPKAEKIILKYVIEHTRNAPSLAAALIRMHFHDCFVNGGPYWNVPTGRRDGVISKAAEALLNLPAPFHNLTTLLTLFGNVGLDANDLVLLSGAQTIGVSHCSSIATRLHNFTGKGDTDPTLDSEYAKNLKTFKCKNINDNTTLIEMDPGSCDTFDLGYYKQVVKRRGLFQSDAALLESFTTRAIIAKQLQSTQGFFAEFAKSMEKMGRINLKIGADGEIRKHCARVNN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0760 261 Gene3D Peroxidase, domain 2 97 239 - -
Aed5g0760 261 PANTHER PEROXIDASE 25-RELATED 71 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PANTHER PEROXIDASE 25-RELATED 3 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 CDD secretory_peroxidase 24 259 IPR033905 GO:0004601|GO:0042744
Aed5g0760 261 Gene3D - 25 71 - -
Aed5g0760 261 SUPERFAMILY Heme-dependent peroxidases 24 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 ProSiteProfiles Plant heme peroxidase family profile. 24 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PANTHER PEROXIDASE 3 71 - -
Aed5g0760 261 PANTHER PEROXIDASE 71 260 - -
Aed5g0760 261 Pfam Peroxidase 71 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 Gene3D - 72 260 - -
Aed5g0760 261 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Aed5g0760 261 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed5g0760 261 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0760 Aed-Chr5 5682697 5684303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0760 10 71 Peroxidase AT4G11290 54.839 7.83e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0760 K00430 - gmx:100785662 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0760 5 5682697 5684303 Aed5g0760 5 5682697 5684303 ECH