Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0758 ATGTCTGAATTCGACACAAACATCCCAATTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACGAAAGAGTATGTGCATGTTCGCGTACAACAGCGTAACGGAAGGAAAAGCCTAACAACAGTTCAAGGATTAAAGAAAGAGTATAGCTATAGCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAAGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTGCTTTCCTTGTGCAGGCTGGCATAGTAAAGAAGGAACACATCAAGCTTCATGGTTTCTAA 342 0.4357 MSEFDTNIPIAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQAGIVKKEHIKLHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0758 113 Gene3D - 2 113 - -
Aed5g0758 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 9 113 IPR005874 GO:0003743
Aed5g0758 113 SUPERFAMILY eIF1-like 8 113 IPR036877 GO:0003743|GO:0006413
Aed5g0758 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Aed5g0758 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Aed5g0758 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Aed5g0758 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Aed5g0758 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Aed5g0758 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0758 Aed-Chr5 5675862 5678221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0758 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 87.611 3.76e-74 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0758 K03113 - gmx:100784390 225.713