Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0756 ATGGCTGGCATAGATCGCTGCTCTGATAATAGCGTTTCTGCTGATTCTACTGAGAAATCAAGCCAAGTTTCAGATGTTGAATTTTCTGAAGCCGAGGAAATCCTTATTGCCATGGTGTATAATCTGGTTGGGGAGAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACTGCAGAAGAAATAGAGAAATATTGGACTTCAAGATCTTCCACTAGCCAATGA 225 0.4178 MAGIDRCSDNSVSADSTEKSSQVSDVEFSEAEEILIAMVYNLVGERWSLIAGRIPGRTAEEIEKYWTSRSSTSQ 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0756 74 Gene3D - 27 69 - -
Aed5g0756 74 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 12 73 - -
Aed5g0756 74 Pfam Myb-like DNA-binding domain 27 67 IPR001005 -
Aed5g0756 74 MobiDBLite consensus disorder prediction 1 26 - -
Aed5g0756 74 MobiDBLite consensus disorder prediction 9 24 - -
Aed5g0756 74 CDD SANT 27 66 IPR001005 -
Aed5g0756 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Aed5g0756 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 12 73 - -
Aed5g0756 74 SUPERFAMILY Homeodomain-like 27 68 IPR009057 -
Aed5g0756 74 SMART sant 24 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0756 Aed-Chr5 5656427 5658000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0756 20 71 MYB Transcription Factor Family AT5G14750 46.154 1.75e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g0756 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0756 - - gmx:778179 131.339