Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0722 ATGTTCAACGGTATGATGGATCCCGATTTGATGAGAATCGCTCAGGAGCAGATGAGTCGCATGTCTCCCACTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAACTGATGAGGATGGCCTCAGAGAGCATGAAGAACATGAGTGCTGAAGACTTTAAACTTGCTGCTGAGCAGTTAAAGCATACCCGTCCCGAAGAAATGGCTGAGATTGGTGAGAAGATGGCTAATGCTTCCCCTGATGAAGTGGCGGCAATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCGGCTGAGATGTTGAAGAAGCAGGGGAATGATCTTCATAATCAAGGAAGGTACAATGATGCTTTGAAGAAGTATATGCTTGCTAAGGAAAACATTAAAGAGGTACCATCTTTCCAGAGTAGAAAGCTTCTTTTGGCATGCTCTCTGAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATAATGAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGTGAAGAACCTTAAGGCTCTTTATCGAAGAGGTCAAGCTTATAAGGAACTAGGTCTACTAAAAGATGCTGTTTCTGATCTGAGCATGGCACTTGAAGTGACCCCTGACGATGATACAATTGCAGTGCTTTTACGGGATGCCAAGGAAAAATTAGCAATGGGAGGTGGTGAGCATGCACCTGGAAGACTAGTAATTGAAGAAATAACCGAAGAAGTTGAGGATGTGCCTTCGGGAAGCTCTTCTTTGGAACAAACAGTGGTTCAACCAAAAAAGTCTGGTGACTCCTCTAAGAGTTATAGTACAGCTAACAATGGAAATCCAAAAACAAATACAGAGAGTTTAGATGCATTGAGAAAAGATCCTGAAGCTTTCAGATCATTCCAAAACTTTGTTTCAAATGCTGATCCTGCCATGCTGGCTTCTATGAATGCTGGGCATTTAAAAGATGTGTCTCCAGATATGCTTAAAACTACCTCTGATATGATTGGTAAAATGTCACCCGAGGAACTTCAAAGAATGCTTGACATGGCTTCTTCATTTCAAGGGAACAACCCATTTTTTAGAGGAGGTTCCCCTGATTCTTCTTTCAACCCTGGATCAATGCCTCCAAATGTGACACCTGACATGTTTAAAGCAGCTAGTGATATGATAGGTAAAATGCCAGCAGATGACCTTAAGAGGATGTTTGAAATGACATCCTCACTGAAAGGGAAAGAATCTACTCCATTAGCAGCAGCAGTAAATGAGACCGAAAGAAATGTTTCCCGGTCAAACTTACCATCATCAAGTACTAATGGAACTACTGCTTTTGGAGAATCAAGTTCTCATAATGTATTTTCAAATATGAGAAATGCTTCTCAGTCAAACTTCCCTTCTTCAAGTACTGATATACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCCATGTTTAAAAATATGAGTCCGGAAATGATGGCAAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGAAGAAGCTGCAAAAGCTCAGCAAGCCATGTCATCCTTATCGCCGGAGAGCTTGGATAAAATGATGCTTTGGGCGGACAGGATTCAAAGAGGAGCTGAATCTGCGAGAAAGACGAAGAACTGGCTGCTAGGGAAACCTGGGATGATCTTGGCAATATGCATGCTCATTTTGGCTGTCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1755 0.4234 MFNGMMDPDLMRIAQEQMSRMSPTELARIQQQMMSNPELMRMASESMKNMSAEDFKLAAEQLKHTRPEEMAEIGEKMANASPDEVAAMRSRVDAQIKYQLSAAEMLKKQGNDLHNQGRYNDALKKYMLAKENIKEVPSFQSRKLLLACSLNLMSCYLKTRQYNECIKEGSEVLAYDVKNLKALYRRGQAYKELGLLKDAVSDLSMALEVTPDDDTIAVLLRDAKEKLAMGGGEHAPGRLVIEEITEEVEDVPSGSSSLEQTVVQPKKSGDSSKSYSTANNGNPKTNTESLDALRKDPEAFRSFQNFVSNADPAMLASMNAGHLKDVSPDMLKTTSDMIGKMSPEELQRMLDMASSFQGNNPFFRGGSPDSSFNPGSMPPNVTPDMFKAASDMIGKMPADDLKRMFEMTSSLKGKESTPLAAAVNETERNVSRSNLPSSSTNGTTAFGESSSHNVFSNMRNASQSNFPSSSTDIQEQMRNQMKDPAMRQMFTSMFKNMSPEMMANMGEQFGVKLSPEEAAKAQQAMSSLSPESLDKMMLWADRIQRGAESARKTKNWLLGKPGMILAICMLILAVILHRLGFIGG 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0722 584 SMART tpr_5 146 179 IPR019734 GO:0005515
Aed5g0722 584 SMART tpr_5 103 136 IPR019734 GO:0005515
Aed5g0722 584 SMART tpr_5 180 213 IPR019734 GO:0005515
Aed5g0722 584 SUPERFAMILY TPR-like 96 226 IPR011990 GO:0005515
Aed5g0722 584 MobiDBLite consensus disorder prediction 410 452 - -
Aed5g0722 584 Gene3D Tetratricopeptide repeat domain 89 230 IPR011990 GO:0005515
Aed5g0722 584 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Aed5g0722 584 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 583 - -
Aed5g0722 584 PANTHER OUTER ENVELOPE PROTEIN 61 59 583 - -
Aed5g0722 584 MobiDBLite consensus disorder prediction 249 289 - -
Aed5g0722 584 MobiDBLite consensus disorder prediction 250 288 - -
Aed5g0722 584 MobiDBLite consensus disorder prediction 422 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0722 Aed-Chr5 5383129 5388076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0722 93 227 Calmodulin-binding Proteins AT5G48570 34.752 2.16e-16 80.5