Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0709 ATGGACGTTGATTCCTCGATGGTGCCGGAGCCCGATCACGATCCGGCGGTGCAGAACCATGCTGAGAGAGACCAGCTAGGAGACTCTCCGTCGCTGTCGTCGTCTTCTTCGTCGCCGGGAGGCGGATCTCCGGCTCAGTCGCCGGCGCAACAGTCGCCTCCGCCGGAGACGGCGGCTCAGGTGCAGCAGCAGCACAGTCCAGTGGTTGGTCCGCGGCTGGCGCCGACTTACACAGTGGTGAATGCAATTTTGGAGAAGAAGGAAGACGGGCCGGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAAGGGACGCCAGGGTACATTGGTCCGCGGCTGATTTTGTTCGGCGGTGCCACCGCGCTTGAAGGGAATTCCGCGGCCTCAGGGACTCCTTCATCCGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATATCCACTGTTATGATGTCATAACTAATAAATGGTCTAGTGCTTATAAGGAATTTAAATGCAGGATAACTCCCATTGGTGAGCCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTGGGAACCATGGTAGTTATTCAGGGGGGCATTGGCCCTGCTGGTTTGTCTGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAGAGGCCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCTGGACCACGCTATGGACACGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTCTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAGCACAGAGATGGTCGTTGGGAGTGGGCCATTGCCCCTGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCAGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGGGGAGGACGGATGGTTGAAGATTCGTCAAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCAGCAGGTGGAGATGCCTCAGTTGAGTTGACACGGCGTTGTAGGCATGCTGCTGCTGCTATTGGCTATGGCATGAGTGAGTCAGTGAACAATTGCAAGAGAATTCCAATTGACACAGTTGCTGAATTCTTTTTTTCTTTATATATATATATATTTGTGATGGCTGGTCAATTCCTGCTATTTCAAGTTTGCACTTTTGTTGAGCACAGCCAGTCAATTCCTGTTGATCTTGCAAGCTTGCTCTTGTGCGTGCTTTGGACAAGGCAAACCATGCCTGAAGCAGATTCTGATGGTTCAGTTGTATTGGGAAATCCAGTTGCCCCCCCTGTAAATGGTGACATGTATACTGATATCAGCGCTGAAAATGCCTTGCTCCCGGGATCTAGGAGAACGAGCAAAGGAGTCGAGTATCTAGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCAGCTGCTAAGGCACGGCAAGTGAACGGAGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCAACACCTAGCGGAAAACAAATATCTTCCTTGATTAAGCCTGATTCTGCTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCATAGAGCTGTGGTTATTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCCGGCGGGTCAGTTATGGGACTCCTGAAAGTGCAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTTGTAGCTCACCTTTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTGGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGCATTTTTTCAAGTGAACCAAGTGTTATACAGCTTAAAGCTCCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATCGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGTCTGGAAACTATTAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTCGGTTTCCGAATTGAGTGCATTGAGAGGATGGGCGAGAGAGATGGTATTTGGGCATGGAACCGTATAAACCGTCTGTTTAATTGGCTTCCTCTAGCAGCACTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGCTCAATAAATCATGTGGAACAAATTGAGAATATTCAGCGTCCAATTACAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGGCTGCGGCCAAATGCTAGGGGTCCAGGATTAGTTACATTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTCTCTGCTACAAACTACTGTGGTATTTGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAATTGATACATCCATTACCACCTGCAATCTCTTCACCGGAAACATCACCGGAATGTATTGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAGCAAATGACCGAGGTTCTCTTGCTTGGATATAG 3066 0.4899 MDVDSSMVPEPDHDPAVQNHAERDQLGDSPSLSSSSSSPGGGSPAQSPAQQSPPPETAAQVQQQHSPVVGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADIHCYDVITNKWSSAYKEFKCRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGYGMSESVNNCKRIPIDTVAEFFFSLYIYIFVMAGQFLLFQVCTFVEHSQSIPVDLASLLLCVLWTRQTMPEADSDGSVVLGNPVAPPVNGDMYTDISAENALLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVIQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWNRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGICTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPECIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0709 1021 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 490 1021 - -
Aed5g0709 1021 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 425 - -
Aed5g0709 1021 Pfam Galactose oxidase, central domain 237 290 - -
Aed5g0709 1021 Pfam Kelch motif 343 389 IPR011498 GO:0005515
Aed5g0709 1021 MobiDBLite consensus disorder prediction 581 595 - -
Aed5g0709 1021 MobiDBLite consensus disorder prediction 567 602 - -
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 823 849 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 717 744 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 752 779 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 935 951 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 913 933 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 785 809 IPR006186 GO:0016787
Aed5g0709 1021 PRINTS Serine/threonine phosphatase family signature 853 880 IPR006186 GO:0016787
Aed5g0709 1021 Pfam Calcineurin-like phosphoesterase 717 924 IPR004843 GO:0016787
Aed5g0709 1021 SUPERFAMILY Kelch motif 149 396 IPR015915 GO:0005515
Aed5g0709 1021 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 490 1021 - -
Aed5g0709 1021 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 425 - -
Aed5g0709 1021 MobiDBLite consensus disorder prediction 1 73 - -
Aed5g0709 1021 SMART pp2a_7 689 975 IPR006186 GO:0016787
Aed5g0709 1021 CDD MPP_Bsu1_C 669 973 IPR041758 -
Aed5g0709 1021 Gene3D - 653 989 IPR029052 -
Aed5g0709 1021 PIRSF STPPP_BSU1 488 1021 IPR012391 GO:0004721|GO:0009742
Aed5g0709 1021 PIRSF STPPP_BSU1 41 439 IPR012391 GO:0004721|GO:0009742
Aed5g0709 1021 MobiDBLite consensus disorder prediction 997 1021 - -
Aed5g0709 1021 Gene3D - 74 279 IPR015915 GO:0005515
Aed5g0709 1021 MobiDBLite consensus disorder prediction 24 69 - -
Aed5g0709 1021 ProSitePatterns Serine/threonine specific protein phosphatases signature. 786 791 IPR006186 GO:0016787
Aed5g0709 1021 Gene3D - 280 428 IPR015915 GO:0005515
Aed5g0709 1021 SUPERFAMILY Metallo-dependent phosphatases 675 981 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0709 Aed-Chr5 5266434 5280396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0709 681 916 Calmodulin-binding Proteins AT5G63870 29.044 7.19e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0709 5 5266434 5280396 Aed5g0709 5 5266434 5280396 ECH
Aed1g0974 1 10010736 10025605 Aed5g0709 5 5266434 5280396 ECH
Aed1g0974 1 10010736 10025605 Aed5g0709 5 5266434 5280396 PCT