Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0704 ATGGCGACGTACTTTCATGGCAGCAGTTCAGAAATCCCTTCCTCCGCTGAAGGGTTGCAGACACTTTACCTTATGAACCCAAACTACGTACCTTACTCTGACAACGCGGCGCAACACCCAACGCAAAACATGCTCCTCGTCAATCCCAACACTAGTAATAATAACAACACTAGTCCCACTTCCACCAACAACGCGCTCAACCTTGCCAACTTCTCCCACGCGCCGCCACCTCCATCTCCCAACAACCACCACCGTGAACAACAACAGCAGCAGCATCACCTGATTGGTGTTACCATTCCCTCTTCAAACTTCCTCGGATCCAACGTCGCCACCGCCGACACCTCTCGATCATCATTCTTTGGACAACACGAATTCTCCGGCTACCACGGCGGTTCCGCCGCCACAACAACCACGACGACGGCATCCCGTGGTAACTATAACCTATGGGGTTCCATATTTGATCAATCTGCGTCAAATATCATGACAGCAACGACACACACCCCATCCAGTAACATGGGATGCGTTGGTGATGCTGTCATGTCAACGCAGATTGGCTCTCATAGGCCTAATCATCTGTCACTTAGCCTTTCATCACAACAAACACCATATAGGTCTCTCTCTGGGGAGATTCATGCTATTTCTCCGGCGAGCCGTGGCGGTGGCGGCGGCGCTGACATGAGGGGTTTGCATAACGGAGTTTCTAGCATGCATAGTGTTGTTTTGGGTTCAAAGTATTTGAAAGCAACACAGGAGCTTCTTGATGAAGTTGTGAATGTGGGCAAGGGAATCTCCAAATGGGAAGAATCTATGGAAGTGGCTAAGAAAGAGAAGATGAAAGGGAATATTGAATCCACTTCTGGTGTTGGTGATGGTTCGAGCTGTGGAGGGGATGAGAATAACGATGGAGGCAAACAAGGAGTTGAACTCAGCACAGCACAAAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTCACCATGCTCGATGAGGTGGAGCAAAGGTACCGACAGTATCACCACCAAATGCAAATAGTGATAACATCATATGAGCAAGCAGCGGGTGTTGGAGCGGCAAAGTCTTACACATCCCTTGCATTGAAGACAATCTCAAAGCAGTTTCGGTGTCTGAAAGATGCAATATCTTCACAAATAAAGACAACGAGCAAAAGCTTGGGTGAAGATGATTGCTTGGGAGTTAAGGTAGAAGGTGGTTCGAGGCTTAGGTATGTTGATCATCAACTTAGACAACAACGTGCATTGCAACAACTAGGAATGATTCAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTTTTTGAACATTTCTTGCACCCGTATCCTAAGGACTCCGATAAGGTGTCTAACTGGTTTATAAATGCCCGAGTTCGGTTATGGAAGCCAATGGTTGAAGAAATGTATTTGGAAGAGGTAAAGCAAGAGCCAAACAGTGGTTCTCAGGATAACAACAACAACAACACAAATAATAGATCAAAAGAATCAAGCAAGGAGTTATTATGGTCAGAATCTAATGCTGCTGATGCACAAGAATCTGGTGTAATGAGACTTGATCACATTAATATTCTCCAATCAAAGGCAGAAAGCTTCAACAACAACAACAACAACAACCCTTCTCCAACAACAGAGATCTCCAATTCCAATTCACTCTCAGCCTCCGGTTTCCATTTTGCTGCAGACATGCAAAGTCCAAACAAGCCAATAAGAAGCACTTCTGAAATAATGCAAAACTCTCCAGGTAGCATTCTTTCAGTGGACAGGGAAATGAAGCCTCATGGAGACACAAACACTAGAGAAGGCCACACCACAAAGTTTGGCATTGAAAACCATGGTGGTTTTGGAGCATTTCCCAATATGGAAGTCGACATTGGAAGGTTTCATCATCATCATCAGCAGCAACTGGCTCCTAGGTTCCATGGAAATGGTGTTTCTCTCACTCTTGGACTTCCACACAACAGTACTCATGATAATCAGAACCTTTCCCTCTCTGGAACACAACATGGATTCATGTCACAGAATATTAGCATGCACTTGGGAATGAGAAGTAGTAACACCAATAATAATGAGAATCATGAGTTTTGTGGGGCCATCAACACTAGTACTACTACTCCACCTTCTTCTCACTCGGGCACCAGTTATGAGAGCATCGACATTCAAAACAGTAGAAAGAGGTTTGCTGCACAGTTGTTGCGGGATTTCGTGGCCTGA 2256 0.4566 MATYFHGSSSEIPSSAEGLQTLYLMNPNYVPYSDNAAQHPTQNMLLVNPNTSNNNNTSPTSTNNALNLANFSHAPPPPSPNNHHREQQQQQHHLIGVTIPSSNFLGSNVATADTSRSSFFGQHEFSGYHGGSAATTTTTTASRGNYNLWGSIFDQSASNIMTATTHTPSSNMGCVGDAVMSTQIGSHRPNHLSLSLSSQQTPYRSLSGEIHAISPASRGGGGGADMRGLHNGVSSMHSVVLGSKYLKATQELLDEVVNVGKGISKWEESMEVAKKEKMKGNIESTSGVGDGSSCGGDENNDGGKQGVELSTAQRQELQMKKSKLVTMLDEVEQRYRQYHHQMQIVITSYEQAAGVGAAKSYTSLALKTISKQFRCLKDAISSQIKTTSKSLGEDDCLGVKVEGGSRLRYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVSNWFINARVRLWKPMVEEMYLEEVKQEPNSGSQDNNNNNTNNRSKESSKELLWSESNAADAQESGVMRLDHINILQSKAESFNNNNNNNPSPTTEISNSNSLSASGFHFAADMQSPNKPIRSTSEIMQNSPGSILSVDREMKPHGDTNTREGHTTKFGIENHGGFGAFPNMEVDIGRFHHHHQQQLAPRFHGNGVSLTLGLPHNSTHDNQNLSLSGTQHGFMSQNISMHLGMRSSNTNNNENHEFCGAINTSTTTPPSSHSGTSYESIDIQNSRKRFAAQLLRDFVA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0704 751 Pfam Associated with HOX 239 381 IPR006563 -
Aed5g0704 751 SUPERFAMILY Homeodomain-like 432 484 IPR009057 -
Aed5g0704 751 MobiDBLite consensus disorder prediction 600 621 - -
Aed5g0704 751 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 693 - -
Aed5g0704 751 MobiDBLite consensus disorder prediction 45 92 - -
Aed5g0704 751 MobiDBLite consensus disorder prediction 603 621 - -
Aed5g0704 751 MobiDBLite consensus disorder prediction 488 528 - -
Aed5g0704 751 Gene3D - 427 462 - -
Aed5g0704 751 Gene3D - 463 491 - -
Aed5g0704 751 Coils Coil 314 334 - -
Aed5g0704 751 CDD homeodomain 431 479 IPR001356 GO:0003677
Aed5g0704 751 MobiDBLite consensus disorder prediction 45 70 - -
Aed5g0704 751 MobiDBLite consensus disorder prediction 544 565 - -
Aed5g0704 751 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 693 - -
Aed5g0704 751 MobiDBLite consensus disorder prediction 490 525 - -
Aed5g0704 751 SMART prehox3 234 382 IPR006563 -
Aed5g0704 751 MobiDBLite consensus disorder prediction 277 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0704 Aed-Chr5 5212387 5217806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0704 1 751 Homeobox Transcription Factor Family AT2G35940 39.312 5.29e-115 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0704 - - gmx:100786883 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0980 1 10063285 10068585 Aed5g0704 5 5212387 5217806 PCT