Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0701 ATGTTGGTGGGTATGATGAAAGAGTGCAGCTTTGTGTTTTTCACCCTTATGATCACAATGGGATGTTGTTATGGTGTCACAGACCCGAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGGTTGAAGAATCCAAAGCTTCTCAAATGGCCAGACGATGGAAATGACCCTTGTGGCCCTCCTTCATGGACTTATGTGTACTGTTCTGGAGGGAGAGTCACTCAGATTCAGACCAAGAATCTAGGTCTCGAAGGATCATTGCCTCCAAGCTTTAACCAGCTCTCAGAGCTTCAGAATTTGGGTCTTCAACGCAACAAACTCAGTGGAGCGTTGCCTAGTTTCAGTGGATTGTCCAAATTGCAATATGCTTTCTTGGATTACAATGCGTTTGATGCAATCCCATCTGATTTCTTCAATGGACTCACCAGCATAAGGGTCCTGTCTCTGGAGGAAAACCTTTCCATGAATGCTACCTCAGGGTGGTCTTTTCCTAAGGACTTGGAAGCTTCAGTGCAATTGACTAATCTTTCTCTAGTCAATTGCAATTTGGTTGGAACATTGCCTGATTTCCTAGGCACATTGCCCTCTCTCACAAATCTAAGGCTTTCAGGCAACAAATTCTCTGGTGCCATTCCATCTAGTTTTAATCGGTCTTCAATTCAGGTTTTGTGGTTAAATGATCAACAAGGAGGTGGCATGACAGGTCCTATCGATGTCATTGCTTCAATGACTTTCCTCAGACAGGTTTGGCTTCATGGAAACCAGTTCACTGGGACAATTCCACAGAACATTGTGAATCTATCTTCCTTGCAGGAGCTCAACCTCAATCGCAATAAACTTGTTGGTTTGATTCCAGATTCCTTGGCAAACATGGACCTTCAAATACTGGTGTTAAATAACAACATGTTCATGGGTCCAATACCAAAGTTTAAGGCTACCACCAAGGTATCTTATGATTCCAATTTGTTTTGTCAGTCTAAGCCTGGGCTTCAATGTGCCCCTCAAGTCACTGCACTGCTGGATTTTCTCAAAAATCTGAATTTCCCTTCAAGTCTTGCTTCTAAATGGTCAGGCAATGATCCGTGTGGAGACTCGTGGTTCGGATTGAGCTGCGATCACAATTCAAAGGTATCTATAATCAATTTGCCAAGACAAAAGCTTAATGGTTCACTGAGTCCCTCACTGGCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGCAGAAAATAGTATTAGCAGCATAGTTTCTAGTAATTTTACCAAATTGAAATCTTTGAGGTTGTTGGATTTAAGTGATAACAATGTTATGCCACCACTTCCAAACTTTGATGGTGGTGTGAAGGTTATTATTGAGGGTAACCCTCTTTTTGTTAATCGATCTGCAAGTAGTTCCAGTCCCATGCCTAGTATAAGAACACCACCTTCAAGTGCACAACCTTCACTGTCTCCGTCTTCAGCACCGTCTCCACCATACTCCCATATGCAACCTTCTCCAAGGCAGAGTCCAAGCTCGAATTTGAATCAGTCTAGTTCTGACCAGTCAAAGCCCCACCCAAATGCCTTGAAAAGATTCAAAACAGTAGCTATGGTAGTTGGAGCTGCAATCTTTACATTTGTATCTCTTTTGGTTACTACTCTACTCGTATGTTGCTTGAAGAAGAAAAAAGCAGCCTCCTTGGGTGCTCTTAGGTCTGCTGTGGTTCACACTAAAGATCCATATTATACAGAAAAAATGACTAAACTTGCAGTTATGAATAGCACCACCGGAAGCTTATCAACAAAGACAGGGACAAGTTCTCTGACCAACATTAGTGGTGAAACTGAGAGCTCTCATGTAACTGAGGATGGAAACATTGTCATCTCTATTCAAGTTCTACGCAAGGTCACCAACAACTTTGCTTCAGAAAACGAGCTAGGCCATGGTGGGTTTGGAACTGTTTACAAAGGTGAAGTAGAAGGTGGCACAAAAATAGCAGTGAAGAGAATGGAGTGTGGAGCTGTTAGCAGTAGAGCACTGGAGGAGTTTCAGTCTGAAATAACTGTTCTTTCCAAGGTCCGGCACAGACATTTAGTATCCCTGCTAGGCTATTCCATTGAAGGAAATGAAAGGCTTTTGGTTTATGAGTATATGCCTCAGGGTGCTCTAAGCATGCATCTTTTTCATTGGAAAAGATTGAAATTCGAACCTTTGTCTTTGTCACGGAGGCTTACAATAGCACTTGATGTTGCTAGAGCGATGGAATATCTTCATGGTCTTGCACGCCAAACCTTCATCCATCGAGACTTGAAGTCGTCTAATATTCTACTGGGAAATGATTTTCGTGCAAAAGTTTCGGATTTTGGTCTGGTGAAACTCGCCCCAGATGGTGAGAAGTCAGTGGCAACAAAGCTTGCTGGAACATTTGGTTACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGATGTGTTCAGCTATGGTGTGGTCTTGATGGAGCTTCTGACTGGACTAATGGCCCTCGACGAGAGTCGGTCAGAGGAGAGCCAGTACTTAGTGGAATGGTTTATGCAAATCAAATCGAGCAAAGAAACGCTTATGGCTGCCATTGATCCAGCTCTTAAAGCAAATGAAGAGACTTTTGAGAGCATTTCCATTGTGTCAGACCTTGCTGGGCACTGCACTAACAGGGATGCAAGTCACAGACCTGATATGAGTCATGCAGTGAATGTGTTATCTGCATTAGTGGAGAAATGGAAACCTATTGATGAAGAATTTGATTATGGCATTGGCATTGACTTCAATCAACCACTTCCTCAGTTGTTGAAAGTTTGGAAGGAATCAGAAGGCAAAGAAGAATCAAGCTACACCAGTGAACACAGTGAAGGAAGCATACCAGCTAGGCCTACTGGTTTTGCAGATTCTTTTACTTCTTCTGATGCAAGATGA 2937 0.4253 MLVGMMKECSFVFFTLMITMGCCYGVTDPNDLKILNDFRKGLKNPKLLKWPDDGNDPCGPPSWTYVYCSGGRVTQIQTKNLGLEGSLPPSFNQLSELQNLGLQRNKLSGALPSFSGLSKLQYAFLDYNAFDAIPSDFFNGLTSIRVLSLEENLSMNATSGWSFPKDLEASVQLTNLSLVNCNLVGTLPDFLGTLPSLTNLRLSGNKFSGAIPSSFNRSSIQVLWLNDQQGGGMTGPIDVIASMTFLRQVWLHGNQFTGTIPQNIVNLSSLQELNLNRNKLVGLIPDSLANMDLQILVLNNNMFMGPIPKFKATTKVSYDSNLFCQSKPGLQCAPQVTALLDFLKNLNFPSSLASKWSGNDPCGDSWFGLSCDHNSKVSIINLPRQKLNGSLSPSLAKLDSLLEIRLAENSISSIVSSNFTKLKSLRLLDLSDNNVMPPLPNFDGGVKVIIEGNPLFVNRSASSSSPMPSIRTPPSSAQPSLSPSSAPSPPYSHMQPSPRQSPSSNLNQSSSDQSKPHPNALKRFKTVAMVVGAAIFTFVSLLVTTLLVCCLKKKKAASLGALRSAVVHTKDPYYTEKMTKLAVMNSTTGSLSTKTGTSSLTNISGETESSHVTEDGNIVISIQVLRKVTNNFASENELGHGGFGTVYKGEVEGGTKIAVKRMECGAVSSRALEEFQSEITVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPQGALSMHLFHWKRLKFEPLSLSRRLTIALDVARAMEYLHGLARQTFIHRDLKSSNILLGNDFRAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRSEESQYLVEWFMQIKSSKETLMAAIDPALKANEETFESISIVSDLAGHCTNRDASHRPDMSHAVNVLSALVEKWKPIDEEFDYGIGIDFNQPLPQLLKVWKESEGKEESSYTSEHSEGSIPARPTGFADSFTSSDAR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0701 978 ProSiteProfiles Protein kinase domain profile. 632 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0701 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
Aed5g0701 978 Gene3D Ribonuclease Inhibitor 29 330 IPR032675 -
Aed5g0701 978 SUPERFAMILY L domain-like 27 314 - -
Aed5g0701 978 CDD STKc_IRAK 638 908 - -
Aed5g0701 978 SUPERFAMILY Protein kinase-like (PK-like) 607 916 IPR011009 -
Aed5g0701 978 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Aed5g0701 978 Gene3D Transferase(Phosphotransferase) domain 1 710 924 - -
Aed5g0701 978 SUPERFAMILY L domain-like 333 442 - -
Aed5g0701 978 MobiDBLite consensus disorder prediction 460 518 - -
Aed5g0701 978 Gene3D Phosphorylase Kinase; domain 1 593 709 - -
Aed5g0701 978 MobiDBLite consensus disorder prediction 497 517 - -
Aed5g0701 978 Pfam Leucine rich repeat N-terminal domain 334 372 IPR013210 -
Aed5g0701 978 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Aed5g0701 978 Pfam Protein tyrosine and serine/threonine kinase 635 907 IPR001245 GO:0004672|GO:0006468
Aed5g0701 978 Gene3D Ribonuclease Inhibitor 334 459 IPR032675 -
Aed5g0701 978 SMART serkin_6 632 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0701 978 MobiDBLite consensus disorder prediction 945 978 - -
Aed5g0701 978 PANTHER OSJNBA0070M12.3 PROTEIN 9 978 - -
Aed5g0701 978 SMART LRR_typ_2 194 217 IPR003591 -
Aed5g0701 978 SMART LRR_typ_2 398 421 IPR003591 -
Aed5g0701 978 SMART LRR_typ_2 267 290 IPR003591 -
Aed5g0701 978 SMART LRR_typ_2 94 116 IPR003591 -
Aed5g0701 978 SMART LRR_typ_2 422 444 IPR003591 -
Aed5g0701 978 SMART LRR_typ_2 117 140 IPR003591 -
Aed5g0701 978 MobiDBLite consensus disorder prediction 460 482 - -
Aed5g0701 978 PANTHER OSJNBA0070M12.3 PROTEIN 9 978 - -
Aed5g0701 978 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0701 Aed-Chr5 5111084 5115238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0701 85 921 Receptor kinase-like Gene Family AT1G55610 28.652 1.19e-72 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed5g0701 PK_Tyr_Ser-Thr 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0701 - - gmx:100815045 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0701 5 5111084 5115238 Aed5g0701 5 5111084 5115238 ECH